RNA–Protein interactions for RNA: ENSMUST00000065997.4

Aplf-202, Transcript of Aprataxin and PNK-like factor, mousemouse

TSL 1 (best) BASIC

Gene Aplf, Length 3,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Aplf-202ENSMUST00000065997 Gm35339A0A140LHH9 1649 aa19.61■□□□□ 0.73
Aplf-202ENSMUST00000065997 NischQ80TM9 1593 aa19.18■□□□□ 0.66
Aplf-202ENSMUST00000065997 Abcc9P70170 1546 aa18.6■□□□□ 0.57
Aplf-202ENSMUST00000065997 Abcc8B2RUS7 1588 aa18.57■□□□□ 0.56
Aplf-202ENSMUST00000065997 ScribQ80U72 1612 aa17.85■□□□□ 0.45
Aplf-202ENSMUST00000065997 NacadQ5SWP3 1504 aa17.4■□□□□ 0.38
Aplf-202ENSMUST00000065997 Kdm5dQ62240 1548 aa17.27■□□□□ 0.36
Aplf-202ENSMUST00000065997 Dcaf1Q80TR8 1506 aa17.26■□□□□ 0.35
Aplf-202ENSMUST00000065997 Sycp2Q9CUU3 1500 aa17.03■□□□□ 0.32
Aplf-202ENSMUST00000065997 Rhox8Q6VSS7 320 aa16.87■□□□□ 0.29
Aplf-202ENSMUST00000065997 Ccdc180J3QNE4 1664 aa16.76■□□□□ 0.27
Aplf-202ENSMUST00000065997 BicraF8VPZ9 1578 aa16.73■□□□□ 0.27
Aplf-202ENSMUST00000065997 Rb1cc1Q9ESK9 1588 aa16.71■□□□□ 0.27
Aplf-202ENSMUST00000065997 Crybg2B7ZCC2 1516 aa16.62■□□□□ 0.25
Aplf-202ENSMUST00000065997 Baz1aO88379 1555 aa16.53■□□□□ 0.24
Aplf-202ENSMUST00000065997 Rpgrip1Q9EPQ2 1331 aa16.48■□□□□ 0.23
Aplf-202ENSMUST00000065997 Rtl1Q7M732 1744 aa16.4■□□□□ 0.22
Aplf-202ENSMUST00000065997 Pds5bQ4VA53 1446 aaKnown RBP16.37■□□□□ 0.21
Aplf-202ENSMUST00000065997 Thoc2B1AZI6 1594 aaKnown RBP16.2■□□□□ 0.18
Aplf-202ENSMUST00000065997 Atad2bE9Q166 1460 aaKnown RBP16.18■□□□□ 0.18
Aplf-202ENSMUST00000065997 Ehmt2Q9Z148 1263 aaKnown RBP16.14■□□□□ 0.17
Aplf-202ENSMUST00000065997 Zcchc6Q5BLK4 1491 aaKnown RBP16.12■□□□□ 0.17
Aplf-202ENSMUST00000065997 Acin1Q9JIX8 1338 aaKnown RBP16.12■□□□□ 0.17
Aplf-202ENSMUST00000065997 Smarca2Q6DIC0 1577 aa16.04■□□□□ 0.16
Aplf-202ENSMUST00000065997 Smarca4Q3TKT4 1613 aaKnown RBP16.04■□□□□ 0.16
Aplf-202ENSMUST00000065997 Dnajc5bQ9CQ94 199 aa16.03■□□□□ 0.16
Aplf-202ENSMUST00000065997 Ercc6F8VPZ5 1481 aa15.98■□□□□ 0.15
Aplf-202ENSMUST00000065997 Baz1bQ9Z277 1479 aa15.94■□□□□ 0.14
Aplf-202ENSMUST00000065997 Iqgap2Q3UQ44 1575 aa15.92■□□□□ 0.14
Aplf-202ENSMUST00000065997 Cc2d2aQ8CFW7 1633 aa15.87■□□□□ 0.13
Aplf-202ENSMUST00000065997 Fam135aQ6NS59 1506 aa15.86■□□□□ 0.13
Aplf-202ENSMUST00000065997 Cecr2E9Q2Z1 1453 aa15.83■□□□□ 0.12
Aplf-202ENSMUST00000065997 Pcgf6Q99NA9 353 aa15.83■□□□□ 0.12
Aplf-202ENSMUST00000065997 Wdr62Q3U3T8 1523 aa15.81■□□□□ 0.12
Aplf-202ENSMUST00000065997 Frmpd1A2AKB4 1549 aa15.73■□□□□ 0.11
Aplf-202ENSMUST00000065997 Phldb1Q6PDH0 1371 aaKnown RBP15.71■□□□□ 0.11
Aplf-202ENSMUST00000065997 Cttnbp2B9EJA2 1648 aa15.64■□□□□ 0.09
Aplf-202ENSMUST00000065997 HrcG5E8J6 738 aa15.63■□□□□ 0.09
Aplf-202ENSMUST00000065997 Brd4Q9ESU6 1400 aaKnown RBP15.6■□□□□ 0.09
Aplf-202ENSMUST00000065997 Ccdc136Q3TVA9 1136 aa15.59■□□□□ 0.09
Aplf-202ENSMUST00000065997 CftrP26361 1476 aa15.58■□□□□ 0.08
Aplf-202ENSMUST00000065997 Unc13aQ4KUS2 1712 aa15.54■□□□□ 0.08
Aplf-202ENSMUST00000065997 Synj1Q8CHC4 1574 aa15.5■□□□□ 0.07
Aplf-202ENSMUST00000065997 Supt5hO55201 1082 aaKnown RBP15.48■□□□□ 0.07
Aplf-202ENSMUST00000065997 Ubl4bQ9CQ84 188 aa15.43■□□□□ 0.06
Aplf-202ENSMUST00000065997 Mrc2Q64449 1479 aa15.43■□□□□ 0.06
Aplf-202ENSMUST00000065997 Trim41Q5NCC3 630 aa15.38■□□□□ 0.05
Aplf-202ENSMUST00000065997 Neurod1Q60867 357 aa15.26■□□□□ 0.03
Aplf-202ENSMUST00000065997 Rsf1E9PWW9 1441 aaKnown RBP15.23■□□□□ 0.03
Aplf-202ENSMUST00000065997 Lamc3Q9R0B6 1581 aa15.2■□□□□ 0.02
Aplf-202ENSMUST00000065997 Zeb1Q64318 1117 aa15.19■□□□□ 0.02
Aplf-202ENSMUST00000065997 Esf1Q3V1V3 845 aaKnown RBP15.16■□□□□ 0.02
Aplf-202ENSMUST00000065997 Cux2P70298 1426 aa15.12■□□□□ 0.01
Aplf-202ENSMUST00000065997 Kif15Q6P9L6 1387 aa15.11■□□□□ 0.01
Aplf-202ENSMUST00000065997 Lrriq1Q0P5X1 1673 aa15.07■□□□□ 0
Aplf-202ENSMUST00000065997 TnnQ80Z71 1560 aa15.03■□□□□ -0
Aplf-202ENSMUST00000065997 Kif21aQ9QXL2 1672 aa15.03■□□□□ -0
Aplf-202ENSMUST00000065997 Top2bQ64511 1612 aa15.03■□□□□ -0
Aplf-202ENSMUST00000065997 Cep164Q5DU05 1446 aa15.01□□□□□ -0.01
Aplf-202ENSMUST00000065997 Cngb1E1AZ71 1325 aa15.01□□□□□ -0.01
Aplf-202ENSMUST00000065997 Gab3Q8BSM5 595 aa14.99□□□□□ -0.01
Aplf-202ENSMUST00000065997 Golga3P55937 1487 aa14.99□□□□□ -0.01
Aplf-202ENSMUST00000065997 Las1lA2BE28 776 aaKnown RBP14.98□□□□□ -0.01
Aplf-202ENSMUST00000065997 Npm1Q61937 292 aaKnown RBP14.96□□□□□ -0.01
Aplf-202ENSMUST00000065997 Ccdc18Q640L5 1455 aa14.95□□□□□ -0.02
Aplf-202ENSMUST00000065997 Eif4g3Q80XI3 1579 aaKnown RBP14.94□□□□□ -0.02
Aplf-202ENSMUST00000065997 Sall2Q9QX96 1004 aa14.93□□□□□ -0.02
Aplf-202ENSMUST00000065997 NefmP08553 848 aa14.9□□□□□ -0.02
Aplf-202ENSMUST00000065997 Mier1Q5UAK0 511 aa14.9□□□□□ -0.02
Aplf-202ENSMUST00000065997 Fmn1Q05860 1466 aa14.87□□□□□ -0.03
Aplf-202ENSMUST00000065997 Camsap1A2AHC3 1581 aa14.87□□□□□ -0.03
Aplf-202ENSMUST00000065997 Chic1Q8CBW7 227 aa14.84□□□□□ -0.03
Aplf-202ENSMUST00000065997 LrpprcQ6PB66 1392 aaKnown RBP14.82□□□□□ -0.04
Aplf-202ENSMUST00000065997 1700123L14RikQ3V2K7 440 aa14.81□□□□□ -0.04
Aplf-202ENSMUST00000065997 Crocc2F6XLV1 1638 aa14.81□□□□□ -0.04
Aplf-202ENSMUST00000065997 Dhx29Q6PGC1 1365 aaKnown RBP14.81□□□□□ -0.04
Aplf-202ENSMUST00000065997 Csrnp3P59055 597 aa14.79□□□□□ -0.04
Aplf-202ENSMUST00000065997 Urb2E9Q7L1 1524 aaKnown RBP14.79□□□□□ -0.04
Aplf-202ENSMUST00000065997 Shroom2A2ALU4 1481 aa14.77□□□□□ -0.04
Aplf-202ENSMUST00000065997 PogzQ8BZH4 1409 aaKnown RBP14.75□□□□□ -0.05
Aplf-202ENSMUST00000065997 Ift140E9PY46 1464 aa14.75□□□□□ -0.05
Aplf-202ENSMUST00000065997 Anks4bQ8K3X6 423 aa14.75□□□□□ -0.05
Aplf-202ENSMUST00000065997 Plb1Q3TTY0 1478 aa14.74□□□□□ -0.05
Aplf-202ENSMUST00000065997 Wdr66E9Q743 1299 aa14.73□□□□□ -0.05
Aplf-202ENSMUST00000065997 Dnajc5P60904 198 aa14.7□□□□□ -0.06
Aplf-202ENSMUST00000065997 Pbrm1Q8BSQ9 1634 aaKnown RBP14.68□□□□□ -0.06
Aplf-202ENSMUST00000065997 Rusc2Q80U22 1514 aa14.66□□□□□ -0.06
Aplf-202ENSMUST00000065997 Grin2bQ01097 1482 aa14.66□□□□□ -0.06
Aplf-202ENSMUST00000065997 Duox2A2AQ99 1517 aa14.65□□□□□ -0.06
Aplf-202ENSMUST00000065997 Ppargc1bQ8VHJ7 1014 aa14.64□□□□□ -0.07
Aplf-202ENSMUST00000065997 Efcab5A0JP43 1406 aa14.63□□□□□ -0.07
Aplf-202ENSMUST00000065997 Il27Q8K3I6 234 aa14.63□□□□□ -0.07
Aplf-202ENSMUST00000065997 Aebp2Q9Z248 504 aaKnown RBP14.62□□□□□ -0.07
Aplf-202ENSMUST00000065997 UbtfP25976 765 aaKnown RBP14.59□□□□□ -0.07
Aplf-202ENSMUST00000065997 Cdk11bP24788 784 aaKnown RBP14.57□□□□□ -0.08
Aplf-202ENSMUST00000065997 Ccdc88bQ4QRL3 1481 aa14.57□□□□□ -0.08
Aplf-202ENSMUST00000065997 NrkQ9R0G8 1455 aa14.57□□□□□ -0.08
Aplf-202ENSMUST00000065997 Top2aQ01320 1528 aaKnown RBP14.56□□□□□ -0.08
Aplf-202ENSMUST00000065997 Cc2d2bA0A286YDU8 1405 aa14.56□□□□□ -0.08
Aplf-202ENSMUST00000065997 Disp1Q3TDN0 1521 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms