RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Eif1aQ60872 144 aaKnown RBP6.75□□□□□ -1.33
Clk1-201ENSMUST00000034868 Eif1axQ8BMJ3 144 aaKnown RBP6.75□□□□□ -1.33
Clk1-201ENSMUST00000034868 Kcng1A2BDX4 514 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Gm3739L7N296 216 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Pla2g2cP48076 150 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Ppp4cP97470 307 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Gjd4Q8BSD4 364 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Pde3aQ9Z0X4 1141 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Eya4Q9Z191 616 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Arhgef10lA2AWP8 1280 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Gm3252E9PUT9 216 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Gm3002E9PW72 216 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Gm3468E9QAJ8 216 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Gm3164L7N2B9 238 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Psmd2Q8VDM4 908 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Gatad2bQ8VHR5 594 aaKnown RBP6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Tomm22Q9CPQ3 142 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Armcx1Q9CX83 456 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Sh3bp5Q9Z131 463 aa6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Orc1Q9Z1N2 840 aaKnown RBP6.74□□□□□ -1.33
Clk1-201ENSMUST00000034868 Krtap28-13A0A087WQP5 138 aa6.73□□□□□ -1.33
Clk1-201ENSMUST00000034868 Impdh2P24547 514 aa6.73□□□□□ -1.33
Clk1-201ENSMUST00000034868 Ptpn5P54830 541 aa6.73□□□□□ -1.33
Clk1-201ENSMUST00000034868 Sema3eP70275 775 aa6.73□□□□□ -1.33
Clk1-201ENSMUST00000034868 Adamts2Q8C9W3 1213 aa6.73□□□□□ -1.33
Clk1-201ENSMUST00000034868 Rrp9Q91WM3 475 aaKnown RBP6.73□□□□□ -1.33
Clk1-201ENSMUST00000034868 Ppp1r3fQ9JIG4 799 aa6.73□□□□□ -1.33
Clk1-201ENSMUST00000034868 Znf354bQ9QXT9 601 aa6.73□□□□□ -1.33
Clk1-201ENSMUST00000034868 Dnmt3aO88508 908 aaKnown RBP6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Cobll1Q3UMF0 1273 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Cwc22Q8C5N3 908 aaKnown RBP6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Cela3bQ9CQ52 269 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Capn10Q9ESK3 666 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Cyb5rlB1AS42 316 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Pnmal2G3X9N3 661 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Baz1aO88379 1555 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Dnaja1P63037 397 aaKnown RBP6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 NxnP97346 435 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Rtkn2Q14B46 604 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 D630036H23RikQ3UQD6 204 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Rc3h1Q4VGL6 1130 aaKnown RBP6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 NntQ61941 1086 aaKnown RBP6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Desi1Q9CQT7 168 aa6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Ssr1Q9CY50 286 aaKnown RBP6.72□□□□□ -1.33
Clk1-201ENSMUST00000034868 Fam43bA2AM80 330 aa6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 Gm11758A2BEI6 360 aa6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 Gm11757A2BEI8 360 aa6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 Gm5624F6ZZG8 207 aa6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 Klhl33G3UW92 533 aa6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 Hoxb3P09026 433 aa6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 Tcf25Q8R3L2 676 aaKnown RBP6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 Raver1Q9CW46 748 aaKnown RBP6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 UvssaQ9D479 717 aa6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 Asxl2Q8BZ32 1370 aa6.71□□□□□ -1.34
Clk1-201ENSMUST00000034868 ClspnQ80YR7 1315 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Pbx2O35984 430 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 MafgO54790 162 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Cyp17a1P27786 507 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Tbc1d9Q3UYK3 1264 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Abtb2Q7TQI7 1024 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Tma7Q8K003 64 aaKnown RBP6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Emid1Q91VF5 444 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Usp26Q99MX1 835 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Tnnt3Q9QZ47 272 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Erbb3Q61526 1339 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Top2bQ64511 1612 aa6.7□□□□□ -1.34
Clk1-201ENSMUST00000034868 Fam171a2A2A699 822 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Saxo1B1AXP3 476 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Ddit3P35639 168 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 InaP46660 501 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Cops2P61202 443 aaKnown RBP6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Rack1P68040 317 aaKnown RBP6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Sik1Q60670 779 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Mre11Q61216 706 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Aebp1Q640N1 1128 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Znf423Q80TS5 1292 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Speer4f1Q9D5Q6 258 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Cep164Q5DU05 1446 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Zcchc11B2RX14 1644 aaKnown RBP6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Guca2aP33680 116 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Naa15Q80UM3 865 aaKnown RBP6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Psapl1Q8C1C1 522 aa6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Stau1Q9Z108 487 aaKnown RBP6.69□□□□□ -1.34
Clk1-201ENSMUST00000034868 Anp32aO35381 247 aa6.68□□□□□ -1.34
Clk1-201ENSMUST00000034868 Gpsm3Q3U1Z5 159 aa6.68□□□□□ -1.34
Clk1-201ENSMUST00000034868 Eef2kmtQ3UZW7 335 aa6.68□□□□□ -1.34
Clk1-201ENSMUST00000034868 Mfsd6Q8CBH5 775 aa6.68□□□□□ -1.34
Clk1-201ENSMUST00000034868 Gm11939A2A592 99 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Plcb2A3KGF7 1181 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Erich6D3Z6S9 713 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Ccdc85cE9Q6B2 420 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Aldh3a2P47740 484 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 PrlrQ08501 608 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Cln3Q61124 438 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Brinp2Q6DFY8 783 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Chmp7Q8R1T1 451 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Ddx41Q91VN6 622 aaKnown RBP6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Cts7Q91ZF2 331 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Kbtbd12Q9D618 625 aa6.67□□□□□ -1.34
Clk1-201ENSMUST00000034868 Gm10073E9Q3T0 114 aa6.67□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms