RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Mapk8ip2Q9ERE9 830 aa16.28■□□□□ 0.2
Clk1-201ENSMUST00000034868 Chic1Q8CBW7 227 aa15.54■□□□□ 0.08
Clk1-201ENSMUST00000034868 Phf23Q8BSN5 401 aa13.77□□□□□ -0.21
Clk1-201ENSMUST00000034868 Plppr3Q7TPB0 716 aa13.33□□□□□ -0.28
Clk1-201ENSMUST00000034868 Gab3Q8BSM5 595 aa12.88□□□□□ -0.35
Clk1-201ENSMUST00000034868 Kcna4Q61423 654 aa12.84□□□□□ -0.35
Clk1-201ENSMUST00000034868 Fam163aQ8CAA5 168 aa12.51□□□□□ -0.41
Clk1-201ENSMUST00000034868 Ube2uB1AUC4 352 aa12.4□□□□□ -0.42
Clk1-201ENSMUST00000034868 Senp3Q9EP97 568 aaKnown RBP12.38□□□□□ -0.43
Clk1-201ENSMUST00000034868 Ppargc1bQ8VHJ7 1014 aa12.03□□□□□ -0.48
Clk1-201ENSMUST00000034868 GapdhsQ64467 440 aa11.73□□□□□ -0.53
Clk1-201ENSMUST00000034868 Dmrt2Q8BG36 561 aa11.51□□□□□ -0.57
Clk1-201ENSMUST00000034868 Slc4a1apE9PX68 744 aa11.39□□□□□ -0.59
Clk1-201ENSMUST00000034868 ArsiQ32KI9 573 aa11.33□□□□□ -0.59
Clk1-201ENSMUST00000034868 Ehmt2Q9Z148 1263 aaKnown RBP11.26□□□□□ -0.61
Clk1-201ENSMUST00000034868 Fam71e1A1L3C1 212 aa11.23□□□□□ -0.61
Clk1-201ENSMUST00000034868 Hoxd11P23813 323 aa11.2□□□□□ -0.62
Clk1-201ENSMUST00000034868 Slc34a2Q9DBP0 697 aa11.13□□□□□ -0.63
Clk1-201ENSMUST00000034868 Znf219Q6IQX8 726 aa10.97□□□□□ -0.65
Clk1-201ENSMUST00000034868 Trap1aP19473 224 aa10.88□□□□□ -0.67
Clk1-201ENSMUST00000034868 AcrbpQ3V140 540 aa10.73□□□□□ -0.69
Clk1-201ENSMUST00000034868 Pde4cQ3UEI1 686 aa10.72□□□□□ -0.69
Clk1-201ENSMUST00000034868 Nlrp6Q91WS2 869 aa10.68□□□□□ -0.7
Clk1-201ENSMUST00000034868 Atf5O70191 283 aa10.67□□□□□ -0.7
Clk1-201ENSMUST00000034868 Dnajc5bQ9CQ94 199 aa10.65□□□□□ -0.71
Clk1-201ENSMUST00000034868 1700123L14RikQ3V2K7 440 aa10.58□□□□□ -0.72
Clk1-201ENSMUST00000034868 Rtn4Q99P72 1162 aaKnown RBP10.58□□□□□ -0.72
Clk1-201ENSMUST00000034868 Cdca7Q9D0M2 382 aa10.52□□□□□ -0.73
Clk1-201ENSMUST00000034868 Prdm10Q3UTQ7 1184 aa10.51□□□□□ -0.73
Clk1-201ENSMUST00000034868 Ppp4r2Q0VGB7 417 aa10.5□□□□□ -0.73
Clk1-201ENSMUST00000034868 Tshz2Q68FE9 1030 aa10.5□□□□□ -0.73
Clk1-201ENSMUST00000034868 Akt1s1Q9D1F4 257 aa10.44□□□□□ -0.74
Clk1-201ENSMUST00000034868 Hs6st3Q9QYK4 470 aa10.44□□□□□ -0.74
Clk1-201ENSMUST00000034868 Ecm2Q5FW85 670 aa10.41□□□□□ -0.74
Clk1-201ENSMUST00000034868 Chrna2Q91X60 512 aa10.37□□□□□ -0.75
Clk1-201ENSMUST00000034868 Rsph4aQ8BYM7 716 aa10.37□□□□□ -0.75
Clk1-201ENSMUST00000034868 Prm3Q62100 101 aa10.35□□□□□ -0.75
Clk1-201ENSMUST00000034868 Npm2Q80W85 207 aa10.31□□□□□ -0.76
Clk1-201ENSMUST00000034868 Rimbp2Q80U40 1072 aa10.26□□□□□ -0.77
Clk1-201ENSMUST00000034868 Prdm16A2A935 1275 aa10.19□□□□□ -0.78
Clk1-201ENSMUST00000034868 Arid3aQ62431 601 aa10.17□□□□□ -0.78
Clk1-201ENSMUST00000034868 Taok2Q6ZQ29 1240 aa10.17□□□□□ -0.78
Clk1-201ENSMUST00000034868 Slc4a5E9Q3M5 1116 aa10.11□□□□□ -0.79
Clk1-201ENSMUST00000034868 Znf704Q9ERQ3 566 aa10.11□□□□□ -0.79
Clk1-201ENSMUST00000034868 Styxl1Q9DAR2 321 aa10.08□□□□□ -0.8
Clk1-201ENSMUST00000034868 CatipB9EKE5 520 aa10.01□□□□□ -0.81
Clk1-201ENSMUST00000034868 MyclP10166 368 aa10.01□□□□□ -0.81
Clk1-201ENSMUST00000034868 Riok3Q9DBU3 519 aaKnown RBP10.01□□□□□ -0.81
Clk1-201ENSMUST00000034868 C1qtnf12Q8R2Z0 308 aa9.95□□□□□ -0.82
Clk1-201ENSMUST00000034868 Cacnb1Q8R3Z5 597 aa9.91□□□□□ -0.82
Clk1-201ENSMUST00000034868 Bach1P97302 739 aa9.81□□□□□ -0.84
Clk1-201ENSMUST00000034868 Vsig10D3YX43 558 aa9.72□□□□□ -0.85
Clk1-201ENSMUST00000034868 WdpcpQ8C456 722 aa9.67□□□□□ -0.86
Clk1-201ENSMUST00000034868 Tcf3P15806 651 aa9.66□□□□□ -0.86
Clk1-201ENSMUST00000034868 Ms4a5Q810P8 197 aa9.65□□□□□ -0.87
Clk1-201ENSMUST00000034868 Trim41Q5NCC3 630 aa9.63□□□□□ -0.87
Clk1-201ENSMUST00000034868 ArxO35085 564 aa9.6□□□□□ -0.87
Clk1-201ENSMUST00000034868 Znf703P0CL69 594 aa9.56□□□□□ -0.88
Clk1-201ENSMUST00000034868 Ildr2B5TVM2 661 aa9.55□□□□□ -0.88
Clk1-201ENSMUST00000034868 Skap1Q3UUV5 355 aa9.52□□□□□ -0.89
Clk1-201ENSMUST00000034868 Esf1Q3V1V3 845 aaKnown RBP9.5□□□□□ -0.89
Clk1-201ENSMUST00000034868 Sox12Q04890 314 aa9.47□□□□□ -0.89
Clk1-201ENSMUST00000034868 Ppp6r1Q7TSI3 856 aa9.45□□□□□ -0.9
Clk1-201ENSMUST00000034868 Ttbk1Q6PCN3 1308 aa9.4□□□□□ -0.9
Clk1-201ENSMUST00000034868 Mkrn3Q60764 544 aa9.35□□□□□ -0.91
Clk1-201ENSMUST00000034868 Ppp1r37Q8BKR5 712 aa9.33□□□□□ -0.92
Clk1-201ENSMUST00000034868 Skida1Q80YR3 822 aa9.28□□□□□ -0.92
Clk1-201ENSMUST00000034868 Zbtb22Q9Z0G7 638 aa9.27□□□□□ -0.92
Clk1-201ENSMUST00000034868 MpndQ3TV65 487 aa9.27□□□□□ -0.93
Clk1-201ENSMUST00000034868 Prr29B1ARI9 187 aa9.26□□□□□ -0.93
Clk1-201ENSMUST00000034868 UbtfP25976 765 aaKnown RBP9.26□□□□□ -0.93
Clk1-201ENSMUST00000034868 Spock2Q9ER58 423 aa9.25□□□□□ -0.93
Clk1-201ENSMUST00000034868 Kcnn1Q9EQR3 537 aa9.24□□□□□ -0.93
Clk1-201ENSMUST00000034868 Ubap1lG3UW59 384 aa9.24□□□□□ -0.93
Clk1-201ENSMUST00000034868 Zeb1Q64318 1117 aa9.22□□□□□ -0.93
Clk1-201ENSMUST00000034868 Grwd1Q810D6 446 aaKnown RBP9.22□□□□□ -0.93
Clk1-201ENSMUST00000034868 Stag3O70576 1240 aa9.22□□□□□ -0.93
Clk1-201ENSMUST00000034868 Slc4a2P13808 1237 aaKnown RBP9.22□□□□□ -0.93
Clk1-201ENSMUST00000034868 Ripply1Q2WG77 201 aa9.22□□□□□ -0.93
Clk1-201ENSMUST00000034868 G430095P16RikE9Q913 147 aa9.2□□□□□ -0.94
Clk1-201ENSMUST00000034868 Egfem1Q8C088 590 aa9.19□□□□□ -0.94
Clk1-201ENSMUST00000034868 Zbtb38Q3LR78 1197 aa9.18□□□□□ -0.94
Clk1-201ENSMUST00000034868 Spryd3E9Q9B3 442 aa9.17□□□□□ -0.94
Clk1-201ENSMUST00000034868 Dnajc5P60904 198 aa9.16□□□□□ -0.94
Clk1-201ENSMUST00000034868 Slc24a1Q91WD8 1130 aa9.16□□□□□ -0.94
Clk1-201ENSMUST00000034868 Tmem132aQ922P8 1018 aa9.16□□□□□ -0.94
Clk1-201ENSMUST00000034868 Npm3Q9CPP0 175 aaKnown RBP9.14□□□□□ -0.95
Clk1-201ENSMUST00000034868 Fbln2P37889 1221 aa9.12□□□□□ -0.95
Clk1-201ENSMUST00000034868 DiexfQ8BTT6 772 aaKnown RBP9.09□□□□□ -0.95
Clk1-201ENSMUST00000034868 Noa1Q9JJG9 693 aaKnown RBP9.09□□□□□ -0.95
Clk1-201ENSMUST00000034868 Zbtb7aO88939 569 aaKnown RBP9.08□□□□□ -0.96
Clk1-201ENSMUST00000034868 Ferd3lQ923Z4 168 aa9.08□□□□□ -0.96
Clk1-201ENSMUST00000034868 Ifnlr1Q8CGK5 535 aa9.06□□□□□ -0.96
Clk1-201ENSMUST00000034868 TimelessQ9R1X4 1197 aa9.05□□□□□ -0.96
Clk1-201ENSMUST00000034868 P3h3Q8CG70 732 aa9.02□□□□□ -0.97
Clk1-201ENSMUST00000034868 MycnP03966 462 aaKnown RBP9□□□□□ -0.97
Clk1-201ENSMUST00000034868 Os9Q8K2C7 672 aa9□□□□□ -0.97
Clk1-201ENSMUST00000034868 Rgl2Q61193 778 aa8.97□□□□□ -0.97
Clk1-201ENSMUST00000034868 VaspP70460 375 aaKnown RBP8.94□□□□□ -0.98
Clk1-201ENSMUST00000034868 Kdm2aP59997 1161 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms