RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Kiaa0556Q8C753 1610 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Podxl2Q8CAE9 603 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Dnajc10Q9DC23 793 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Anapc15-psA0A140T8L6 141 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Kcna6Q61923 529 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Eif4a2P10630 407 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Dip2cE9PWR4 1557 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Kif3cO35066 796 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Ppm1fQ8CGA0 452 aa11.79□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Rhot2Q8JZN7 620 aa11.78□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Plxnc1Q9QZC2 1574 aa11.78□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Idi1P58044 227 aa11.78□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Mcm10Q0VBD2 885 aa11.78□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Nol12Q8BG17 217 aa11.78□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Terf2O35144 541 aa11.78□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Neurod6P48986 337 aa11.77□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Exoc5Q3TPX4 708 aa11.77□□□□□ -0.52
Ldlr-201ENSMUST00000034713 BcanQ61361 883 aa11.77□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Rapgef4Q9EQZ6 1011 aa11.77□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Tfip11Q9ERA6 838 aaKnown RBP11.77□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Dusp9Q7TNL7 452 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Ppp6r1Q7TSI3 856 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 TnmdQ9EP64 317 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Setd1bQ8CFT2 1985 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Jmjd4Q8BFT6 427 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Hnrnpul1Q8VDM6 859 aaKnown RBP11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Cep57l1Q8VDS7 400 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Amotl1Q9D4H4 968 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Krt85Q9Z2T6 507 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Tulp4Q9JIL5 1547 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Pmfbp1Q9WVQ0 1022 aa11.77□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Gm16486A0A1D5RMD1 1434 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Ddx19aQ61655 478 aaKnown RBP11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Cdc42bpgQ80UW5 1551 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 OptnQ8K3K8 584 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Rims1Q99NE5 1463 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Pdia4P08003 638 aaKnown RBP11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Drc7Q6V3W6 876 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Plekhm2Q80TQ5 1018 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Emilin2Q8K482 1074 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Chrna2Q91X60 512 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 IbspQ61711 324 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Jakmip1Q8BVL9 626 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Nup88Q8CEC0 753 aaKnown RBP11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Cul7Q8VE73 1689 aa11.76□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Wdr78E9PYY5 807 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Gse1Q3U3C9 1213 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Trim34aQ99PP6 485 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Tmco3Q8BH01 678 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Smc2Q8CG48 1191 aaKnown RBP11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Amotl2Q8K371 772 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 DmtnQ9WV69 405 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Wdr17E9Q271 1322 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Adgrb3Q80ZF8 1522 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Kif21bQ9QXL1 1668 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Pde4dQ01063 747 aa11.75□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Exoc6bA6H5Z3 810 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 CastP51125 788 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Cers3Q1A3B0 383 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Ppm1eQ80TL0 749 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Nlgn1Q99K10 843 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Sugp2Q8CH09 1067 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Nat10Q8K224 1024 aaKnown RBP11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Otud6bQ8K2H2 294 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Top1mtQ8R4U6 593 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Uggt1Q6P5E4 1551 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Knl1Q66JQ7 1612 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Hecw2Q6I6G8 1578 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Syce3B5KM66 88 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Cnnm3Q32NY4 713 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Klc3Q91W40 508 aa11.74□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Rcan3Q9JKK0 239 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Cfap58B2RW38 873 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Hoxc9P09633 260 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Strn4P58404 760 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Hvcn1Q3U2S8 269 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Srgap3Q812A2 1099 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Trim29Q8R2Q0 587 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Stk3Q9JI10 497 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Arhgap23Q69ZH9 1483 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Myo3aQ8K3H5 1613 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Ccdc155Q80VJ8 648 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Fam43aQ8BUP8 424 aa11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Ftsj3Q9DBE9 838 aaKnown RBP11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Wdr33Q8K4P0 1330 aaKnown RBP11.73□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Ptpdc1Q6NZK8 747 aa11.72□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Rufy1Q8BIJ7 712 aa11.72□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Bag4Q8CI61 457 aa11.72□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Eif2ak4Q9QZ05 1648 aa11.72□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Eya1P97767 591 aa11.72□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Cwc27Q3TKY6 469 aa11.72□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Necab1Q8BG18 352 aa11.72□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Stk38Q91VJ4 465 aa11.72□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Trim34bJ3QNR8 485 aa11.71□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Nlrp3Q8R4B8 1033 aa11.71□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Mical1Q8VDP3 1048 aa11.71□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Krt82Q99M74 516 aa11.71□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Odf2lQ9D478 642 aa11.71□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Mapk8ip1Q9WVI9 707 aa11.71□□□□□ -0.53
Ldlr-201ENSMUST00000034713 Abca6Q8K441 1624 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms