RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Nkx2-3P97334 362 aa10.61□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Dcaf5Q80T85 946 aa10.61□□□□□ -0.71
Ssr3-201ENSMUST00000029414 GsdmaQ9EST1 446 aa10.61□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Sos1Q62245 1319 aa10.61□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Wdr66E9Q743 1299 aa10.61□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Smarcc1P97496 1104 aa10.61□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Cap2Q9CYT6 476 aa10.61□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Zfyve9A2A8R0 1397 aa10.61□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Gm13023A2A8N2 498 aa10.6□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Sall2Q9QX96 1004 aa10.6□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Kiaa1107Q80TK0 1369 aa10.6□□□□□ -0.71
Ssr3-201ENSMUST00000029414 AceP09470 1312 aa10.6□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Col23a1Q8K4G2 532 aa10.6□□□□□ -0.71
Ssr3-201ENSMUST00000029414 TmpoQ61033 693 aaKnown RBP10.59□□□□□ -0.71
Ssr3-201ENSMUST00000029414 U2af1Q9D883 239 aaKnown RBP10.59□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Lama4P97927 1816 aa10.59□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Msl1Q6PDM1 616 aa10.59□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Adcy9P51830 1353 aa10.58□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Ccdc155Q80VJ8 648 aa10.58□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Hirip3Q8BLH7 601 aa10.58□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Sumf1Q8R0F3 372 aa10.58□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Ddx60E9PZQ1 1711 aa10.58□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Atf5O70191 283 aa10.58□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Prom2Q3UUY6 835 aa10.58□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Cabp2Q9JLK4 216 aa10.58□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Smg7Q5RJH6 1138 aaKnown RBP10.57□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Casz1Q9CWL2 1761 aa10.57□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Dlg5E9Q9R9 1921 aa10.57□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Snap23O09044 210 aa10.57□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Egfem1Q8C088 590 aa10.57□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Chrna2Q91X60 512 aa10.57□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Iqcf3Q9D498 203 aa10.57□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Miga2Q8BK03 593 aa10.56□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Znf541Q0GGX2 1363 aa10.56□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Itgb4A2A863 1818 aa10.56□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Q4VA45 678 aa10.56□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Efcab2Q9CQ46 164 aa10.56□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Frmpd3A0A140LIW3 1774 aa10.56□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Rad23bP54728 416 aa10.56□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Anp32bQ9EST5 272 aaKnown RBP10.56□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Magea6O89010 325 aa10.55□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Magea3Q6T340 320 aa10.55□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Pde4dQ01063 747 aa10.55□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Plcd4Q8K3R3 807 aa10.55□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Znrd1-asQ8R0E5 213 aa10.55□□□□□ -0.72
Ssr3-201ENSMUST00000029414 RtcbQ99LF4 505 aaKnown RBP10.54□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Tcerg1Q8CGF7 1100 aaKnown RBP10.54□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Sipa1l3G3X9J0 1776 aa10.54□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Atf7ipQ7TT18 1306 aa10.53□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Q7TT23 1179 aa10.53□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Mrps5Q99N87 432 aaKnown RBP10.53□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Usp21Q9QZL6 566 aa10.53□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Sgip1Q8VD37 806 aa10.53□□□□□ -0.72
Ssr3-201ENSMUST00000029414 MetP16056 1379 aa10.52□□□□□ -0.72
Ssr3-201ENSMUST00000029414 Rtf1A2AQ19 715 aaKnown RBP10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Lrrc43Q3V0L5 667 aa10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 BccipQ9CWI3 316 aa10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 ScaperF8VQ70 1398 aaKnown RBP10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Col4a1P02463 1669 aa10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Ppef1O35655 650 aa10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Rpgrip1lQ8CG73 1264 aa10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Ppm1fQ8CGA0 452 aa10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Usp19Q3UJD6 1360 aa10.52□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Rnf180Q3U827 592 aa10.51□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Btbd11Q6GQW0 1109 aa10.51□□□□□ -0.73
Ssr3-201ENSMUST00000029414 CpzQ8R4V4 654 aa10.51□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Mapk8ip3Q9ESN9 1337 aa10.51□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Amhr2Q8K592 568 aa10.5□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Mylk2Q8VCR8 613 aa10.5□□□□□ -0.73
Ssr3-201ENSMUST00000029414 HmcesQ8R1M0 353 aaKnown RBP10.5□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Syde2E9PUP1 1314 aa10.5□□□□□ -0.73
Ssr3-201ENSMUST00000029414 PigbQ9JJQ0 542 aa10.49□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Apaf1O88879 1249 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Tlr8P58682 1032 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Zcwpw1Q6IR42 630 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Col4a5Q63ZW6 1691 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 1810065E05RikQ5NC41 235 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Slfnl1Q8BHW9 410 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Zbtb1Q91VL9 713 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Kif13bA0A286YCV9 1847 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Uhrf1bp1B2KF50 1429 aa10.48□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Tgfb2P27090 414 aa10.47□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Clcn1Q64347 994 aa10.47□□□□□ -0.73
Ssr3-201ENSMUST00000029414 BcorQ8CGN4 1759 aa10.47□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Atp1b3P97370 278 aa10.47□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Cers3Q1A3B0 383 aa10.47□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Iqsec3Q3TES0 1195 aa10.46□□□□□ -0.73
Ssr3-201ENSMUST00000029414 Col1a2Q01149 1372 aa10.46□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Map4k4P97820 1233 aaKnown RBP10.46□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Gm12185Q5NCB2 835 aa10.46□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Srp68Q8BMA6 625 aaKnown RBP10.46□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Camkk2Q8C078 588 aa10.46□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Nip7Q9CXK8 180 aaKnown RBP10.46□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Kcnn1Q9EQR3 537 aa10.46□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Ubn2Q80WC1 1314 aa10.45□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Cavin4A2AMM0 362 aa10.45□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Cfap70D3YVL2 1141 aa10.45□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Flad1Q8R123 492 aa10.45□□□□□ -0.74
Ssr3-201ENSMUST00000029414 TefQ9JLC6 301 aa10.45□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Dpf1Q9QX66 387 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms