RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Abcc12Q80WJ6 1366 aa30.53■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Rnf123Q5XPI3 1314 aa30.52■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Zkscan2G3X952 960 aa30.52■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Mmp8O70138 465 aa30.52■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Cyp2d12Q8BVD2 504 aa30.52■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Mcm4P49717 862 aa30.5■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Unc13bQ9Z1N9 1602 aa30.49■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Ddit3P35639 168 aa30.49■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Thsd7aQ69ZU6 1645 aa30.48■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Nid2O88322 1403 aa30.48■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Erc2Q6PH08 957 aa30.48■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Alpk3Q924C5 1678 aa30.48■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Casq1O09165 405 aa30.47■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Fmnl2A2APV2 1086 aa30.47■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 CoilQ5SU73 570 aa30.47■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Amotl2Q8K371 772 aa30.47■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Topaz1E5FYH1 1653 aa30.46■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Cc2d1aQ8K1A6 943 aa30.46■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Q9D2X8 372 aa30.46■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Wdr17E9Q271 1322 aa30.46■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Bcar3Q9QZK2 820 aa30.46■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Atg3Q9CPX6 314 aa30.45■■■□□ 2.47
Cldnd1-201ENSMUST00000023426 Mcmdc2E9Q956 681 aa30.44■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Eif4a1P60843 406 aaKnown RBP30.44■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Plcb2A3KGF7 1181 aa30.43■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Mrps27Q8BK72 415 aaKnown RBP30.42■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Noc3lQ8VI84 807 aaKnown RBP30.42■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Cwc27Q3TKY6 469 aa30.41■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Ptpdc1Q6NZK8 747 aa30.41■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Dnajc10Q9DC23 793 aa30.4■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Echdc1Q9D9V3 322 aa30.4■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Tnnt1O88346 262 aa30.39■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Dlg5E9Q9R9 1921 aa30.39■■■□□ 2.46
Cldnd1-201ENSMUST00000023426 Cyp2d11P24457 504 aa30.38■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Isy1Q69ZQ2 285 aaKnown RBP30.38■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 RestQ8VIG1 1082 aa30.38■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Ppp1r37Q8BKR5 712 aa30.37■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Aox2Q5SGK3 1345 aa30.36■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Nol8Q3UHX0 1147 aaKnown RBP30.35■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Cyp27a1Q9DBG1 533 aa30.35■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Col1a2Q01149 1372 aa30.35■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Zkscan1Q8BGS3 561 aaKnown RBP30.35■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Spryd3E9Q9B3 442 aa30.34■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Btbd11Q6GQW0 1109 aa30.34■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Siglec1Q62230 1695 aa30.33■■■□□ 2.45
Cldnd1-201ENSMUST00000023426 Ier5O89113 308 aa30.32■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Hmox1P14901 289 aa30.32■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 PsapQ61207 557 aaKnown RBP30.32■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 BcorQ8CGN4 1759 aa30.32■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Bend3Q6PAL0 825 aa30.31■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 PtmsQ9D0J8 101 aaKnown RBP30.31■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 TnrQ8BYI9 1358 aa30.31■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Zkscan16A2ALW2 728 aa30.3■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Gli3Q61602 1583 aa30.3■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 MccE9PWI3 1003 aa30.29■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Tmem119Q8R138 280 aa30.28■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Anapc15P60007 132 aa30.28■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Cct4P80315 539 aaKnown RBP30.27■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Arhgef1Q61210 920 aaKnown RBP30.27■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Nrxn3Q6P9K9 1571 aa30.27■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Simc1E9Q6E9 1354 aa30.27■■■□□ 2.44
Cldnd1-201ENSMUST00000023426 Bag4Q8CI61 457 aa30.26■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Kcna6Q61923 529 aa30.25■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Dmrtc1Q9D9R7 182 aa30.25■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Nol11Q8BJW5 723 aaKnown RBP30.25■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 AnlnQ8K298 1121 aaKnown RBP30.25■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 LlphQ9D945 130 aaKnown RBP30.25■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Fkbp4P30416 458 aa30.24■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Prune1Q8BIW1 454 aa30.24■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Slain2Q8CI08 581 aa30.24■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Dnttip2Q8R2M2 758 aaKnown RBP30.24■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Bloc1s4Q8VED2 215 aa30.24■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Irx6Q9ER75 438 aa30.24■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Zap70P43404 618 aa30.23■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 TkfcQ8VC30 578 aa30.23■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Hsp90b1P08113 802 aaKnown RBP30.23■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Dzip1Q8BMD2 852 aa30.22■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Adcy9P51830 1353 aa30.22■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Tpx2A2APB8 745 aaKnown RBP30.22■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Phf14Q9D4H9 881 aa30.22■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Cfdp1O88271 295 aaKnown RBP30.21■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Nkx2-3P97334 362 aa30.21■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Stk11ipQ3TAA7 1072 aa30.21■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 GckrQ91X44 587 aa30.21■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Exoc6bA6H5Z3 810 aa30.2■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Farp2Q91VS8 1065 aa30.2■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Eif3aP23116 1344 aaKnown RBP30.2■■■□□ 2.43
Cldnd1-201ENSMUST00000023426 Col15a1O35206 1367 aa30.2■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Tceal9Q9DD24 104 aa30.2■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Vwa3bJ9JI28 736 aa30.19■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 CalcaP70160 136 aa30.19■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Atp10bB1AWN4 1474 aa30.19■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Mphosph10Q810V0 681 aaKnown RBP30.19■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 PrkcshO08795 521 aa30.18■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Atp6v1dP57746 247 aa30.18■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 DekQ7TNV0 380 aaKnown RBP30.18■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Taf7Q9R1C0 341 aa30.18■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 HellsQ60848 821 aa30.17■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Wnk3Q80XP9 1757 aa30.17■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Mum1Q6DID5 682 aa30.17■■■□□ 2.42
Retrieved 100 of 22,080 RNA–protein pairs in 75.1 ms