RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Fam50bQ9WTJ8 334 aa12.37□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Slain2Q8CI08 581 aa12.36□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Nucb1Q02819 459 aaKnown RBP12.36□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Ncbp3Q8BZR9 615 aaKnown RBP12.36□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Rab11fip3Q8CHD8 1047 aa12.36□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Tmc1Q8R4P5 757 aa12.36□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Mlh1Q9JK91 760 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Adcy9P51830 1353 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Nfat5Q9WV30 1534 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Gm9992B2RWK3 458 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Ppfia3P60469 1194 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Eif4a1P60843 406 aaKnown RBP12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Unc93aQ710D3 458 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Pip4k2bQ80XI4 416 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Rtf1A2AQ19 715 aaKnown RBP12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Gadd45bP22339 160 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Ppip5k2Q6ZQB6 1129 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Ptpn23Q6PB44 1692 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Bach1P97302 739 aa12.35□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Mon2Q80TL7 1715 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Zkscan16A2ALW2 728 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Mcm4P49717 862 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Tceanc2Q8R2M0 207 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Lama3Q61789 3330 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Unc5clQ6R653 518 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Arap3Q8R5G7 1538 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Plcb2A3KGF7 1181 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Fgd1P52734 960 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Mum1Q6DID5 682 aa12.34□□□□□ -0.43
Rnft1-201ENSMUST00000020827 LratQ9JI60 231 aa12.33□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Atf5O70191 283 aa12.33□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Kcnq3Q8K3F6 873 aa12.33□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Dhx38Q80X98 1228 aa12.33□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Col15a1O35206 1367 aa12.33□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Atp10bB1AWN4 1474 aa12.33□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Acsbg1Q99PU5 721 aa12.33□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Prkab2Q6PAM0 271 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 TatQ8QZR1 454 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 CenppQ9CZ92 286 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Mmp8O70138 465 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Adam1aQ60813 791 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Eif4g2Q62448 906 aaKnown RBP12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Cyp27a1Q9DBG1 533 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Thsd7aQ69ZU6 1645 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Rasa1E9PYG6 1038 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Dzip1Q8BMD2 852 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 E4f1Q8CCE9 783 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 DpydQ8CHR6 1025 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Ciz1Q8VEH2 845 aa12.32□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Mst1rQ62190 1378 aa12.31□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Phactr2B1AVP0 632 aa12.31□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Irx3P81067 507 aa12.31□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Ercc3P49135 783 aa12.31□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Hoxb7P09024 217 aa12.31□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Slc4a10Q5DTL9 1118 aa12.31□□□□□ -0.44
Rnft1-201ENSMUST00000020827 DekQ7TNV0 380 aaKnown RBP12.31□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Aox2Q5SGK3 1345 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Col14a1Q80X19 1797 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Aldh8a1Q8BH00 487 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Sirt1Q923E4 737 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Slit2Q9R1B9 1521 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Gm10471E9Q1C7 252 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Bend3Q6PAL0 825 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Tmem2Q5FWI3 1383 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Babam1Q3UI43 333 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Cyp46a1Q9WVK8 500 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Trpm3Q5F4S9 1721 aa12.3□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Nup153E9Q3G8 1462 aaKnown RBP12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 EappQ5BU09 281 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 CoilQ5SU73 570 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Ptpdc1Q6NZK8 747 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Pus3Q9JI38 481 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Sos1Q62245 1319 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Robo1O89026 1612 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Cavin2Q63918 418 aaKnown RBP12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Tns3Q5SSZ5 1440 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Igflr1Q3U4N7 345 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Btbd11Q6GQW0 1109 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Txnrd1Q9JMH6 613 aa12.29□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Pmfbp1Q9WVQ0 1022 aa12.28□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Cfdp1O88271 295 aaKnown RBP12.28□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Map3k2Q61083 619 aa12.28□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Ier5O89113 308 aa12.28□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Wwc1Q5SXA9 1104 aa12.28□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Mphosph10Q810V0 681 aaKnown RBP12.28□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Ncapd2Q8K2Z4 1392 aa12.27□□□□□ -0.44
Rnft1-201ENSMUST00000020827 NmiO35309 314 aa12.27□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Rbm27Q5SFM8 1060 aaKnown RBP12.27□□□□□ -0.44
Rnft1-201ENSMUST00000020827 Jakmip1Q8BVL9 626 aa12.27□□□□□ -0.44
Rnft1-201ENSMUST00000020827 SlkO54988 1233 aa12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Rbm33Q9CXK9 1231 aaKnown RBP12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Wdr17E9Q271 1322 aa12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Map7O88735 730 aa12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Gnai2P08752 355 aaKnown RBP12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 HypkQ9CR41 129 aa12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Slfnl1Q8BHW9 410 aa12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Aldh1l2Q8K009 923 aa12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Nphp1Q9QY53 687 aa12.27□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Fam228bQ497Q6 232 aa12.26□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Cdca7lQ922M5 438 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms