Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 DUSP5P1-201ENST00000441325 1139 ntBASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 AC092597.1-201ENST00000487352 616 ntBASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 AC112497.1-201ENST00000624824 639 ntBASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1G3Q9Y6M4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 KRT8P7-201ENST00000533003 1432 ntBASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 AL450487.1-201ENST00000426799 995 ntBASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 SEC1P-202ENST00000473944 940 ntBASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1G3Q9Y6M4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 CLEC4GP1-201ENST00000596555 870 ntBASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 Z82202.1-201ENST00000623446 1880 ntBASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 AL109659.2-201ENST00000606809 1674 ntBASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G3Q9Y6M4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
CSNK1G3Q9Y6M4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G3Q9Y6M4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G3Q9Y6M4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G3Q9Y6M4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CSNK1G3Q9Y6M4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G3Q9Y6M4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G3Q9Y6M4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms