Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.86■□□□□ 0.61
PKP3Q9Y446 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 CCR12P-201ENST00000446203 998 ntBASIC18.86■□□□□ 0.61
PKP3Q9Y446 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 TNXA-203ENST00000507684 2038 ntBASIC18.86■□□□□ 0.61
PKP3Q9Y446 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 AL512353.2-201ENST00000448759 1962 ntBASIC18.86■□□□□ 0.61
PKP3Q9Y446 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
PKP3Q9Y446 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP3Q9Y446 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP3Q9Y446 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PKP3Q9Y446 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 TSPY17P-201ENST00000450329 467 ntBASIC18.84■□□□□ 0.61
PKP3Q9Y446 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 BX088651.1-201ENST00000540551 451 ntBASIC18.84■□□□□ 0.61
PKP3Q9Y446 NAPSB-206ENST00000562112 1266 ntBASIC18.84■□□□□ 0.61
PKP3Q9Y446 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 AC116562.4-202ENST00000641738 218 ntBASIC18.84■□□□□ 0.61
PKP3Q9Y446 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PKP3Q9Y446 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP3Q9Y446 KRT8P32-201ENST00000512863 1461 ntBASIC18.84■□□□□ 0.61
PKP3Q9Y446 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP3Q9Y446 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP3Q9Y446 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PKP3Q9Y446 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PKP3Q9Y446 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PKP3Q9Y446 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PKP3Q9Y446 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.83■□□□□ 0.61
PKP3Q9Y446 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PKP3Q9Y446 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.83■□□□□ 0.61
PKP3Q9Y446 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP3Q9Y446 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP3Q9Y446 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PKP3Q9Y446 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms