Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GNEQ9Y223 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GNEQ9Y223 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
GNEQ9Y223 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.91■□□□□ 0.94
GNEQ9Y223 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.91■□□□□ 0.94
GNEQ9Y223 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.91■□□□□ 0.94
GNEQ9Y223 AC012615.1-201ENST00000565797 1299 ntBASIC20.91■□□□□ 0.94
GNEQ9Y223 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GNEQ9Y223 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GNEQ9Y223 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GNEQ9Y223 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.9■□□□□ 0.94
GNEQ9Y223 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
GNEQ9Y223 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.9■□□□□ 0.94
GNEQ9Y223 MIR3180-4-201ENST00000582223 153 ntBASIC20.9■□□□□ 0.94
GNEQ9Y223 AC104692.2-201ENST00000603054 253 ntBASIC20.9■□□□□ 0.94
GNEQ9Y223 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.9■□□□□ 0.94
GNEQ9Y223 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GNEQ9Y223 IRX1P1-201ENST00000438849 1838 ntBASIC20.9■□□□□ 0.94
GNEQ9Y223 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.9■□□□□ 0.94
GNEQ9Y223 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GNEQ9Y223 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GNEQ9Y223 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.89■□□□□ 0.94
GNEQ9Y223 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GNEQ9Y223 AC034236.2-201ENST00000606662 1610 ntBASIC20.89■□□□□ 0.94
GNEQ9Y223 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.89■□□□□ 0.94
GNEQ9Y223 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GNEQ9Y223 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.89■□□□□ 0.93
GNEQ9Y223 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.89■□□□□ 0.93
GNEQ9Y223 LINC01521-201ENST00000504184 1943 ntBASIC20.89■□□□□ 0.93
GNEQ9Y223 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GNEQ9Y223 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
GNEQ9Y223 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.89■□□□□ 0.93
GNEQ9Y223 AP003733.1-201ENST00000491725 852 ntBASIC20.89■□□□□ 0.93
GNEQ9Y223 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.89■□□□□ 0.93
GNEQ9Y223 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.89■□□□□ 0.93
GNEQ9Y223 AL121772.3-201ENST00000610840 674 ntBASIC20.89■□□□□ 0.93
GNEQ9Y223 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GNEQ9Y223 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.89■□□□□ 0.93
GNEQ9Y223 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.89■□□□□ 0.93
GNEQ9Y223 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GNEQ9Y223 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GNEQ9Y223 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GNEQ9Y223 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
GNEQ9Y223 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
GNEQ9Y223 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GNEQ9Y223 AC006333.2-201ENST00000607957 2099 ntBASIC20.89■□□□□ 0.93
GNEQ9Y223 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
GNEQ9Y223 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.88■□□□□ 0.93
GNEQ9Y223 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.88■□□□□ 0.93
GNEQ9Y223 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.88■□□□□ 0.93
GNEQ9Y223 AC009078.2-202ENST00000463353 338 ntBASIC20.88■□□□□ 0.93
GNEQ9Y223 FOSL1P1-201ENST00000511041 816 ntBASIC20.88■□□□□ 0.93
GNEQ9Y223 AC091304.2-201ENST00000564639 760 ntBASIC20.88■□□□□ 0.93
GNEQ9Y223 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.88■□□□□ 0.93
GNEQ9Y223 AC090616.6-201ENST00000582640 721 ntBASIC20.88■□□□□ 0.93
GNEQ9Y223 AL031008.1-201ENST00000619963 541 ntBASIC20.88■□□□□ 0.93
GNEQ9Y223 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.88■□□□□ 0.93
GNEQ9Y223 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.88■□□□□ 0.93
GNEQ9Y223 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.88■□□□□ 0.93
GNEQ9Y223 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GNEQ9Y223 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
GNEQ9Y223 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.88■□□□□ 0.93
GNEQ9Y223 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GNEQ9Y223 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.87■□□□□ 0.93
GNEQ9Y223 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GNEQ9Y223 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
GNEQ9Y223 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GNEQ9Y223 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms