Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 NOC2LP1-202ENST00000452600 2235 ntBASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 HEIH-201ENST00000623091 1652 ntBASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2BQ9UQN3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 RCC2P6-201ENST00000526625 1557 ntBASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 HLA-L-209ENST00000420110 1011 ntBASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 KRT17P3-201ENST00000420566 1262 ntBASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 Z85996.1-201ENST00000494644 937 ntBASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 AL023875.1-201ENST00000640777 796 ntBASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 AL499627.1-201ENST00000569373 2188 ntBASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CHMP2BQ9UQN3 AC073592.3-201ENST00000625118 1834 ntBASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 KRASP1-201ENST00000407852 552 ntBASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2BQ9UQN3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms