Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 STARP1-201ENST00000397973 869 ntBASIC19.85■□□□□ 0.77
CDH9Q9ULB4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 AL359075.1-203ENST00000462729 1002 ntBASIC19.85■□□□□ 0.77
CDH9Q9ULB4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 AC087388.1-201ENST00000571370 1112 ntBASIC19.85■□□□□ 0.77
CDH9Q9ULB4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 MYC-208ENST00000641036 567 ntBASIC19.85■□□□□ 0.77
CDH9Q9ULB4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 HOXB1-202ENST00000577092 1414 ntBASIC19.85■□□□□ 0.77
CDH9Q9ULB4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH9Q9ULB4 AC034236.2-201ENST00000606662 1610 ntBASIC19.84■□□□□ 0.77
CDH9Q9ULB4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 KRT18P23-201ENST00000435622 1283 ntBASIC19.83■□□□□ 0.77
CDH9Q9ULB4 KRT18P38-201ENST00000449496 1282 ntBASIC19.83■□□□□ 0.77
CDH9Q9ULB4 SEC1P-202ENST00000473944 940 ntBASIC19.83■□□□□ 0.77
CDH9Q9ULB4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH9Q9ULB4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH9Q9ULB4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH9Q9ULB4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH9Q9ULB4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms