Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 AC113347.1-201ENST00000413321 391 ntBASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 AL512353.2-201ENST00000448759 1962 ntBASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CUEDC1Q9NWM3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 TSPY14P-201ENST00000303979 915 ntBASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 SLC25A1P2-201ENST00000430693 912 ntBASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 MIR4674-201ENST00000582457 87 ntBASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 TNXA-203ENST00000507684 2038 ntBASIC18.15■□□□□ 0.5
CUEDC1Q9NWM3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CUEDC1Q9NWM3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.14■□□□□ 0.5
CUEDC1Q9NWM3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CUEDC1Q9NWM3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CUEDC1Q9NWM3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 AC092338.2-201ENST00000568827 1415 ntBASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CUEDC1Q9NWM3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 GPAT2P1-201ENST00000444924 1672 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 AC007663.1-201ENST00000438948 1240 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 CCR12P-201ENST00000446203 998 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 AP003041.3-201ENST00000527151 707 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 EGLN1P1-201ENST00000531623 762 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 AC116562.4-202ENST00000641738 218 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms