Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC241585.3-202ENST00000628937 1088 ntBASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 AC245100.8-202ENST00000629247 1058 ntBASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 AP001094.4-201ENST00000579008 2176 ntBASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 AL023806.1-201ENST00000603994 1649 ntBASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SMCO4Q9NRQ5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMCO4Q9NRQ5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 AC138028.4-201ENST00000564984 1845 ntBASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMCO4Q9NRQ5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 FLJ16779-201ENST00000612722 7638 ntBASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.75□□□□□ -0.05
SMCO4Q9NRQ5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms