Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 AP003071.4-201ENST00000562276 1284 ntBASIC23.69■■□□□ 1.38
CHMP4BQ9H444 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 WIZP1-201ENST00000531444 2299 ntBASIC23.69■■□□□ 1.38
CHMP4BQ9H444 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP4BQ9H444 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.68■■□□□ 1.38
CHMP4BQ9H444 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 UNC93B2-201ENST00000285383 730 ntBASIC23.67■■□□□ 1.38
CHMP4BQ9H444 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 CRYGFP-201ENST00000418459 633 ntBASIC23.67■■□□□ 1.38
CHMP4BQ9H444 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CHMP4BQ9H444 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 KRT17P2-201ENST00000300992 1314 ntBASIC23.66■■□□□ 1.38
CHMP4BQ9H444 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHMP4BQ9H444 AC073592.3-201ENST00000625118 1834 ntBASIC23.66■■□□□ 1.38
CHMP4BQ9H444 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 AC090164.3-201ENST00000610780 2143 ntBASIC23.65■■□□□ 1.38
CHMP4BQ9H444 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms