Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 AL121672.3-201ENST00000608644 468 ntBASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 CHCHD2P8-201ENST00000429873 447 ntBASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 MIR3180-4-201ENST00000582223 153 ntBASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PTPN23Q9H3S7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 BX276092.5-203ENST00000456199 560 ntBASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 KRT8P26-201ENST00000534154 1276 ntBASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PTPN23Q9H3S7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
PTPN23Q9H3S7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.12
PTPN23Q9H3S7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
PTPN23Q9H3S7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
PTPN23Q9H3S7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC28.26■■■□□ 2.11
PTPN23Q9H3S7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PTPN23Q9H3S7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC28.26■■■□□ 2.11
PTPN23Q9H3S7 AC083906.6-201ENST00000641366 219 ntBASIC28.26■■■□□ 2.11
PTPN23Q9H3S7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PTPN23Q9H3S7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
PTPN23Q9H3S7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC28.26■■■□□ 2.11
PTPN23Q9H3S7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PTPN23Q9H3S7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 AL357033.4-201ENST00000617703 1807 ntBASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 AL450487.1-201ENST00000426799 995 ntBASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 TSSC2-201ENST00000450217 709 ntBASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 AC011498.5-201ENST00000592027 486 ntBASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 AL390719.2-201ENST00000606993 987 ntBASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTPN23Q9H3S7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PTPN23Q9H3S7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PTPN23Q9H3S7 AC005332.7-201ENST00000614046 2005 ntBASIC28.23■■■□□ 2.11
PTPN23Q9H3S7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PTPN23Q9H3S7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PTPN23Q9H3S7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms