Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 ABALON-201ENST00000629058 1903 ntBASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 TSPY6P-201ENST00000448518 926 ntBASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 AC073592.3-201ENST00000625118 1834 ntBASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD4Q9H0A8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 AL160286.2-201ENST00000567150 934 ntBASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD4Q9H0A8 NOC2LP2-201ENST00000407594 1944 ntBASIC16.58■□□□□ 0.25
COMMD4Q9H0A8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD4Q9H0A8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.58■□□□□ 0.25
COMMD4Q9H0A8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
COMMD4Q9H0A8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
COMMD4Q9H0A8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD4Q9H0A8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 PRKY-204ENST00000533551 1019 ntBASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms