Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
AMBRA1Q9C0C7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
AMBRA1Q9C0C7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
AMBRA1Q9C0C7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.58■□□□□ 0.41
AMBRA1Q9C0C7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
AMBRA1Q9C0C7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.58■□□□□ 0.41
AMBRA1Q9C0C7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AMBRA1Q9C0C7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 POM121L13P-201ENST00000422362 380 ntBASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 AC006058.3-201ENST00000606217 1069 ntBASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
AMBRA1Q9C0C7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 AIRN-201ENST00000601203 4374 ntBASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 AC128676.1-201ENST00000454392 318 ntBASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AMBRA1Q9C0C7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 PRORSD1P-201ENST00000295112 541 ntBASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 KRT17P3-201ENST00000420566 1262 ntBASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 TSPY21P-201ENST00000433481 731 ntBASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms