Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CPNE1Q99829 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE1Q99829 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE1Q99829 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CPNE1Q99829 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.79■□□□□ 0.6
CPNE1Q99829 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE1Q99829 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 ESRRAP1-201ENST00000400596 1257 ntBASIC18.79■□□□□ 0.6
CPNE1Q99829 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CPNE1Q99829 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CPNE1Q99829 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CPNE1Q99829 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.79■□□□□ 0.6
CPNE1Q99829 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE1Q99829 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CPNE1Q99829 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE1Q99829 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE1Q99829 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE1Q99829 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE1Q99829 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CPNE1Q99829 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.78■□□□□ 0.6
CPNE1Q99829 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE1Q99829 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 KRT18P6-201ENST00000555540 1265 ntBASIC18.78■□□□□ 0.6
CPNE1Q99829 RN7SL471P-201ENST00000580476 299 ntBASIC18.78■□□□□ 0.6
CPNE1Q99829 AL353708.3-201ENST00000610272 989 ntBASIC18.78■□□□□ 0.6
CPNE1Q99829 MYC-208ENST00000641036 567 ntBASIC18.78■□□□□ 0.6
CPNE1Q99829 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CPNE1Q99829 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE1Q99829 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE1Q99829 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE1Q99829 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CPNE1Q99829 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE1Q99829 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE1Q99829 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE1Q99829 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CPNE1Q99829 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE1Q99829 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE1Q99829 AL499627.1-201ENST00000569373 2188 ntBASIC18.77■□□□□ 0.6
CPNE1Q99829 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE1Q99829 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.77■□□□□ 0.6
CPNE1Q99829 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.77■□□□□ 0.6
CPNE1Q99829 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE1Q99829 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE1Q99829 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE1Q99829 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.77■□□□□ 0.6
CPNE1Q99829 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE1Q99829 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CPNE1Q99829 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE1Q99829 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE1Q99829 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CPNE1Q99829 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE1Q99829 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE1Q99829 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE1Q99829 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms