Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
NPAS1Q99742 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.1■□□□□ 0.33
NPAS1Q99742 ECEL1P3-201ENST00000427961 737 ntBASIC17.1■□□□□ 0.33
NPAS1Q99742 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.1■□□□□ 0.33
NPAS1Q99742 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 AC007663.1-201ENST00000438948 1240 ntBASIC17.1■□□□□ 0.33
NPAS1Q99742 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.1■□□□□ 0.33
NPAS1Q99742 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS1Q99742 AP003041.3-201ENST00000527151 707 ntBASIC17.1■□□□□ 0.33
NPAS1Q99742 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.1■□□□□ 0.33
NPAS1Q99742 C2orf69P3-201ENST00000565542 1120 ntBASIC17.1■□□□□ 0.33
NPAS1Q99742 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
NPAS1Q99742 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS1Q99742 LINC01568-207ENST00000641790 1380 ntBASIC17.1■□□□□ 0.33
NPAS1Q99742 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.1■□□□□ 0.33
NPAS1Q99742 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
NPAS1Q99742 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 GPAT2P1-201ENST00000444924 1672 ntBASIC17.1■□□□□ 0.33
NPAS1Q99742 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.09■□□□□ 0.33
NPAS1Q99742 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NPAS1Q99742 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.09■□□□□ 0.33
NPAS1Q99742 CA15P1-201ENST00000481698 905 ntBASIC17.09■□□□□ 0.33
NPAS1Q99742 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
NPAS1Q99742 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 EGLN1P1-201ENST00000531623 762 ntBASIC17.09■□□□□ 0.33
NPAS1Q99742 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.09■□□□□ 0.33
NPAS1Q99742 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.09■□□□□ 0.33
NPAS1Q99742 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
NPAS1Q99742 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS1Q99742 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NPAS1Q99742 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 AL512353.2-201ENST00000448759 1962 ntBASIC17.09■□□□□ 0.33
NPAS1Q99742 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NPAS1Q99742 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS1Q99742 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS1Q99742 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS1Q99742 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.08■□□□□ 0.33
NPAS1Q99742 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
NPAS1Q99742 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.08■□□□□ 0.33
NPAS1Q99742 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS1Q99742 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS1Q99742 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.08■□□□□ 0.33
NPAS1Q99742 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS1Q99742 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS1Q99742 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS1Q99742 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.08■□□□□ 0.32
NPAS1Q99742 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS1Q99742 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS1Q99742 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS1Q99742 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.08■□□□□ 0.32
NPAS1Q99742 SLC25A1P2-201ENST00000430693 912 ntBASIC17.08■□□□□ 0.32
NPAS1Q99742 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.08■□□□□ 0.32
NPAS1Q99742 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NPAS1Q99742 AL353719.1-201ENST00000566847 864 ntBASIC17.08■□□□□ 0.32
NPAS1Q99742 FAM87A-204ENST00000613235 858 ntBASIC17.08■□□□□ 0.32
NPAS1Q99742 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.08■□□□□ 0.32
NPAS1Q99742 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS1Q99742 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.08■□□□□ 0.32
NPAS1Q99742 AC004408.2-201ENST00000623613 2777 ntBASIC17.08■□□□□ 0.32
NPAS1Q99742 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.08■□□□□ 0.32
NPAS1Q99742 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS1Q99742 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS1Q99742 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NPAS1Q99742 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS1Q99742 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.07■□□□□ 0.32
NPAS1Q99742 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS1Q99742 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS1Q99742 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS1Q99742 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS1Q99742 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.07■□□□□ 0.32
NPAS1Q99742 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS1Q99742 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.07■□□□□ 0.32
NPAS1Q99742 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms