Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV9Q99603 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRGV9Q99603 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.67□□□□□ -0.06
TRGV9Q99603 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV9Q99603 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.67□□□□□ -0.06
TRGV9Q99603 MTDHP1-201ENST00000605323 784 ntBASIC14.67□□□□□ -0.06
TRGV9Q99603 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV9Q99603 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV9Q99603 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV9Q99603 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV9Q99603 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV9Q99603 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.67□□□□□ -0.06
TRGV9Q99603 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRGV9Q99603 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV9Q99603 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 MTMR9LP-203ENST00000426597 1545 ntBASIC14.66□□□□□ -0.06
TRGV9Q99603 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRGV9Q99603 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.66□□□□□ -0.06
TRGV9Q99603 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.66□□□□□ -0.06
TRGV9Q99603 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 KRT8P32-201ENST00000512863 1461 ntBASIC14.66□□□□□ -0.06
TRGV9Q99603 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.66□□□□□ -0.06
TRGV9Q99603 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 MIR935-201ENST00000401179 91 ntBASIC14.66□□□□□ -0.06
TRGV9Q99603 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 PRSS44-201ENST00000515154 1146 ntBASIC14.66□□□□□ -0.06
TRGV9Q99603 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.66□□□□□ -0.06
TRGV9Q99603 AC008403.3-201ENST00000598924 454 ntBASIC14.66□□□□□ -0.06
TRGV9Q99603 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.66□□□□□ -0.06
TRGV9Q99603 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.66□□□□□ -0.06
TRGV9Q99603 AC104771.1-201ENST00000603335 964 ntBASIC14.66□□□□□ -0.06
TRGV9Q99603 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.66□□□□□ -0.06
TRGV9Q99603 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
TRGV9Q99603 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.66□□□□□ -0.06
TRGV9Q99603 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRGV9Q99603 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.66□□□□□ -0.06
TRGV9Q99603 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.66□□□□□ -0.06
TRGV9Q99603 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV9Q99603 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.66□□□□□ -0.06
TRGV9Q99603 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.65□□□□□ -0.06
TRGV9Q99603 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.65□□□□□ -0.06
TRGV9Q99603 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TRGV9Q99603 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.65□□□□□ -0.06
TRGV9Q99603 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
TRGV9Q99603 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.65□□□□□ -0.06
TRGV9Q99603 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.65□□□□□ -0.06
TRGV9Q99603 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRGV9Q99603 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.65□□□□□ -0.06
TRGV9Q99603 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.65□□□□□ -0.06
TRGV9Q99603 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 KRT16P5-201ENST00000455284 522 ntBASIC14.65□□□□□ -0.06
TRGV9Q99603 AP003097.1-201ENST00000530657 1135 ntBASIC14.65□□□□□ -0.06
TRGV9Q99603 AC069544.1-201ENST00000609399 999 ntBASIC14.65□□□□□ -0.06
TRGV9Q99603 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.65□□□□□ -0.06
TRGV9Q99603 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TRGV9Q99603 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.65□□□□□ -0.06
TRGV9Q99603 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.65□□□□□ -0.06
TRGV9Q99603 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 AC018470.1-201ENST00000624790 3129 ntBASIC14.65□□□□□ -0.06
TRGV9Q99603 KRT8P3-201ENST00000519669 1449 ntBASIC14.65□□□□□ -0.06
TRGV9Q99603 AC112777.1-201ENST00000540175 1423 ntBASIC14.65□□□□□ -0.06
TRGV9Q99603 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRGV9Q99603 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
TRGV9Q99603 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.64□□□□□ -0.07
TRGV9Q99603 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms