Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB18PQ96TA0 AC073592.3-201ENST00000625118 1834 ntBASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 AC097488.1-201ENST00000507834 756 ntBASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 AC026471.5-201ENST00000615068 467 ntBASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 TMEM191A-211ENST00000637163 1067 ntBASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 AC008556.1-201ENST00000610908 2040 ntBASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB18PQ96TA0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 DGCR10-201ENST00000609839 495 ntBASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB18PQ96TA0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 AC008550.1-201ENST00000511500 884 ntBASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 AP001412.1-201ENST00000608405 714 ntBASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHB18PQ96TA0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms