Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 AL139384.1-201ENST00000612143 3047 ntBASIC14.2□□□□□ -0.14
AP1S3Q96PC3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP1S3Q96PC3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.18□□□□□ -0.14
AP1S3Q96PC3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms