Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 AL121906.2-201ENST00000621597 723 ntBASIC16.16■□□□□ 0.18
CMTM3Q96MX0 AC068587.9-201ENST00000641814 219 ntBASIC16.16■□□□□ 0.18
CMTM3Q96MX0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 KRT8P45-201ENST00000414328 1447 ntBASIC16.16■□□□□ 0.18
CMTM3Q96MX0 RCC2P6-201ENST00000526625 1557 ntBASIC16.16■□□□□ 0.18
CMTM3Q96MX0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMTM3Q96MX0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMTM3Q96MX0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CMTM3Q96MX0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CMTM3Q96MX0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 AL645608.8-201ENST00000606034 2086 ntBASIC16.14■□□□□ 0.17
CMTM3Q96MX0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 LSM12P1-201ENST00000411836 588 ntBASIC16.14■□□□□ 0.17
CMTM3Q96MX0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 TSPY23P-201ENST00000440136 739 ntBASIC16.14■□□□□ 0.17
CMTM3Q96MX0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.14■□□□□ 0.17
CMTM3Q96MX0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms