Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHAMP1Q96JM3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.79■■□□□ 1.08
CHAMP1Q96JM3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.79■■□□□ 1.08
CHAMP1Q96JM3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHAMP1Q96JM3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHAMP1Q96JM3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 C1QL1P1-201ENST00000568105 661 ntBASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 AC099343.3-201ENST00000605834 2503 ntBASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.78■■□□□ 1.08
CHAMP1Q96JM3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 AC069152.1-201ENST00000438030 544 ntBASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHAMP1Q96JM3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHAMP1Q96JM3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CHAMP1Q96JM3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 TSPY21P-201ENST00000433481 731 ntBASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 NBPF21P-201ENST00000425093 1451 ntBASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHAMP1Q96JM3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 POM121L13P-201ENST00000422362 380 ntBASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 Z85996.1-201ENST00000494644 937 ntBASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 KRT18P6-201ENST00000555540 1265 ntBASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 ESPNP-201ENST00000270691 2015 ntBASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHAMP1Q96JM3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms