Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 AC020916.1-201ENST00000587762 1774 ntBASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC47A1Q96FL8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC47A1Q96FL8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 AL162741.1-201ENST00000565563 1558 ntBASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 AL355802.2-201ENST00000402069 882 ntBASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 UNC93B4-201ENST00000505679 747 ntBASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC47A1Q96FL8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
SLC47A1Q96FL8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms