Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.05■□□□□ 0.8
SHC3Q92529 FITM1-202ENST00000559294 800 ntBASIC20.05■□□□□ 0.8
SHC3Q92529 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.05■□□□□ 0.8
SHC3Q92529 AP000525.1-201ENST00000608286 694 ntBASIC20.05■□□□□ 0.8
SHC3Q92529 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.05■□□□□ 0.8
SHC3Q92529 AL023803.3-201ENST00000615559 522 ntBASIC20.05■□□□□ 0.8
SHC3Q92529 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SHC3Q92529 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.05■□□□□ 0.8
SHC3Q92529 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SHC3Q92529 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.04■□□□□ 0.8
SHC3Q92529 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.04■□□□□ 0.8
SHC3Q92529 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.04■□□□□ 0.8
SHC3Q92529 AL355075.4-201ENST00000554988 638 ntBASIC20.04■□□□□ 0.8
SHC3Q92529 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.04■□□□□ 0.8
SHC3Q92529 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.04■□□□□ 0.8
SHC3Q92529 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
SHC3Q92529 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHC3Q92529 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.03■□□□□ 0.8
SHC3Q92529 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.03■□□□□ 0.8
SHC3Q92529 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.03■□□□□ 0.8
SHC3Q92529 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SHC3Q92529 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.03■□□□□ 0.8
SHC3Q92529 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SHC3Q92529 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.03■□□□□ 0.8
SHC3Q92529 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SHC3Q92529 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.03■□□□□ 0.8
SHC3Q92529 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.03■□□□□ 0.8
SHC3Q92529 MIR4674-201ENST00000582457 87 ntBASIC20.03■□□□□ 0.8
SHC3Q92529 MIR4497-201ENST00000583208 89 ntBASIC20.03■□□□□ 0.8
SHC3Q92529 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.03■□□□□ 0.8
SHC3Q92529 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SHC3Q92529 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SHC3Q92529 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHC3Q92529 KRT17P2-201ENST00000300992 1314 ntBASIC20.02■□□□□ 0.8
SHC3Q92529 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHC3Q92529 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC3Q92529 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SHC3Q92529 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.02■□□□□ 0.8
SHC3Q92529 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC3Q92529 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.02■□□□□ 0.8
SHC3Q92529 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC3Q92529 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SHC3Q92529 AL390955.1-201ENST00000428694 934 ntBASIC20.02■□□□□ 0.8
SHC3Q92529 MCCD1P1-208ENST00000445732 328 ntBASIC20.02■□□□□ 0.8
SHC3Q92529 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.02■□□□□ 0.8
SHC3Q92529 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.02■□□□□ 0.8
SHC3Q92529 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SHC3Q92529 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC3Q92529 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SHC3Q92529 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.02■□□□□ 0.79
SHC3Q92529 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SHC3Q92529 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC3Q92529 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC3Q92529 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SHC3Q92529 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.02■□□□□ 0.79
SHC3Q92529 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC3Q92529 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC3Q92529 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC3Q92529 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SHC3Q92529 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC3Q92529 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.01■□□□□ 0.79
SHC3Q92529 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC3Q92529 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC3Q92529 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC3Q92529 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC3Q92529 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms