Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LMO3Q8TAP4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LMO3Q8TAP4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LMO3Q8TAP4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LMO3Q8TAP4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LMO3Q8TAP4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 SLC25A1P2-201ENST00000430693 912 ntBASIC20.14■□□□□ 0.81
LMO3Q8TAP4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LMO3Q8TAP4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 CYP2D8P-201ENST00000433633 1490 ntBASIC20.13■□□□□ 0.81
LMO3Q8TAP4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 MCCD1P1-208ENST00000445732 328 ntBASIC20.13■□□□□ 0.81
LMO3Q8TAP4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 AC093827.2-201ENST00000512654 315 ntBASIC20.13■□□□□ 0.81
LMO3Q8TAP4 AP003041.3-201ENST00000527151 707 ntBASIC20.13■□□□□ 0.81
LMO3Q8TAP4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.13■□□□□ 0.81
LMO3Q8TAP4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 INGX-201ENST00000359239 846 ntBASIC20.12■□□□□ 0.81
LMO3Q8TAP4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 BICD1-207ENST00000551848 1962 ntBASIC20.12■□□□□ 0.81
LMO3Q8TAP4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMO3Q8TAP4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 AC112777.1-201ENST00000540175 1423 ntBASIC20.11■□□□□ 0.81
LMO3Q8TAP4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 TSPY14P-201ENST00000303979 915 ntBASIC20.11■□□□□ 0.81
LMO3Q8TAP4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.11■□□□□ 0.81
LMO3Q8TAP4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 AC007663.1-201ENST00000438948 1240 ntBASIC20.11■□□□□ 0.81
LMO3Q8TAP4 TSPY17P-201ENST00000450329 467 ntBASIC20.11■□□□□ 0.81
LMO3Q8TAP4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.11■□□□□ 0.81
LMO3Q8TAP4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms