Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 AP006587.1-201ENST00000534129 1502 ntBASIC18.37■□□□□ 0.53
CPSF7Q8N684 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.37■□□□□ 0.53
CPSF7Q8N684 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPSF7Q8N684 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPSF7Q8N684 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.36■□□□□ 0.53
CPSF7Q8N684 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 MIR718-201ENST00000390190 70 ntBASIC18.35■□□□□ 0.53
CPSF7Q8N684 AC239809.2-201ENST00000415381 517 ntBASIC18.35■□□□□ 0.53
CPSF7Q8N684 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 AC067852.2-201ENST00000590513 2313 ntBASIC18.35■□□□□ 0.53
CPSF7Q8N684 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPSF7Q8N684 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CPSF7Q8N684 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 LTB4R2-202ENST00000528054 3092 ntBASIC18.34■□□□□ 0.53
CPSF7Q8N684 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms