Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYNPOQ8N3V7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYNPOQ8N3V7 KRT18P1-202ENST00000452408 1331 ntBASIC19.08■□□□□ 0.65
SYNPOQ8N3V7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 TSPY19P-201ENST00000418461 509 ntBASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 TSPY18P-201ENST00000441642 509 ntBASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 AL121772.3-201ENST00000610840 674 ntBASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 AL391807.1-203ENST00000604392 2365 ntBASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYNPOQ8N3V7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 LINC01711-201ENST00000598340 967 ntBASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 AL157888.1-201ENST00000631930 593 ntBASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNPOQ8N3V7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 IFNL4P1-201ENST00000607083 540 ntBASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SYNPOQ8N3V7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPOQ8N3V7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms