Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM4Q86VH4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 HEIH-201ENST00000623091 1652 ntBASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 AC120498.9-201ENST00000339021 3867 ntBASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 RNF152P1-201ENST00000397754 604 ntBASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 AC010331.1-201ENST00000611423 582 ntBASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 AC011558.1-201ENST00000623459 338 ntBASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 AC083906.6-201ENST00000641366 219 ntBASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM4Q86VH4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM4Q86VH4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms