Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC119751.4-201ENST00000507498 357 ntBASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R3CPQ6ZMV5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC004264.1-201ENST00000608354 794 ntBASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC107905.1-201ENST00000616204 426 ntBASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC106733.1-201ENST00000624476 1038 ntBASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC130448.1-201ENST00000624179 1733 ntBASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PPP4R3CPQ6ZMV5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.64■■□□□ 1.06
PPP4R3CPQ6ZMV5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 MTND4P6-201ENST00000438297 472 ntBASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC092106.1-201ENST00000444291 373 ntBASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 VDAC1P12-201ENST00000451853 882 ntBASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 CCDC58-205ENST00000479899 545 ntTSL 3 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC025811.1-201ENST00000604312 472 ntBASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.64■■□□□ 1.05
PPP4R3CPQ6ZMV5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 CCNB2P1-201ENST00000399411 1150 ntBASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 GTF2IP5-201ENST00000414608 731 ntBASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 RPSAP41-201ENST00000439695 860 ntBASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms