RNA–Protein interactions for RNA: ENST00000417599.6

SMARCA2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-211ENST00000417599 AEBP2Q6ZN18 517 aaPredicted RBP30.42■■■□□ 2.46
SMARCA2-211ENST00000417599 CHIC1Q5VXU3 224 aa30.07■■■□□ 2.4
SMARCA2-211ENST00000417599 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
SMARCA2-211ENST00000417599 SENP3Q9H4L4 574 aaPredicted RBP25.92■■□□□ 1.74
SMARCA2-211ENST00000417599 PLPPR3Q6T4P5 718 aa24.59■■□□□ 1.53
SMARCA2-211ENST00000417599 FOXD1Q16676 465 aa23.92■■□□□ 1.42
SMARCA2-211ENST00000417599 ADRA2BP18089 450 aa23.19■■□□□ 1.3
SMARCA2-211ENST00000417599 PPP6R1Q9UPN7 881 aa23.16■■□□□ 1.3
SMARCA2-211ENST00000417599 PIAS4Q8N2W9 510 aaPredicted RBP22.69■■□□□ 1.22
SMARCA2-211ENST00000417599 MSH5O43196 834 aa22.08■■□□□ 1.13
SMARCA2-211ENST00000417599 PPP4R3CPQ6ZMV5 832 aa21.64■■□□□ 1.05
SMARCA2-211ENST00000417599 KCNA4P22459 653 aa21.41■■□□□ 1.02
SMARCA2-211ENST00000417599 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
SMARCA2-211ENST00000417599 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
SMARCA2-211ENST00000417599 CNKSR2Q8WXI2 1034 aa21.03■□□□□ 0.96
SMARCA2-211ENST00000417599 MAPK8IP2Q13387 824 aaPredicted RBP20.92■□□□□ 0.94
SMARCA2-211ENST00000417599 NPM3O75607 178 aaKnown RBP20.83■□□□□ 0.93
SMARCA2-211ENST00000417599 DMRT2Q9Y5R5 561 aa20.7■□□□□ 0.9
SMARCA2-211ENST00000417599 RNF216Q9NWF9 866 aaPredicted RBP20.55■□□□□ 0.88
SMARCA2-211ENST00000417599 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
SMARCA2-211ENST00000417599 HOXD11P31277 338 aaPredicted RBP20.37■□□□□ 0.85
SMARCA2-211ENST00000417599 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
SMARCA2-211ENST00000417599 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
SMARCA2-211ENST00000417599 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
SMARCA2-211ENST00000417599 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
SMARCA2-211ENST00000417599 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
SMARCA2-211ENST00000417599 ZBTB22O15209 634 aa19.66■□□□□ 0.74
SMARCA2-211ENST00000417599 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
SMARCA2-211ENST00000417599 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
SMARCA2-211ENST00000417599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.7
SMARCA2-211ENST00000417599 MYCNP04198 464 aaPredicted RBP19.33■□□□□ 0.68
SMARCA2-211ENST00000417599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
SMARCA2-211ENST00000417599 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
SMARCA2-211ENST00000417599 U3KPZ7 1027 aaPredicted RBP19.1■□□□□ 0.65
SMARCA2-211ENST00000417599 ATXN8OSP0DMR3 200 aa19.04■□□□□ 0.64
SMARCA2-211ENST00000417599 SAMD1Q6SPF0 538 aaPredicted RBP19.01■□□□□ 0.63
SMARCA2-211ENST00000417599 APLP2Q06481 763 aa18.88■□□□□ 0.61
SMARCA2-211ENST00000417599 RNF39Q9H2S5 420 aa18.87■□□□□ 0.61
SMARCA2-211ENST00000417599 C1QBPQ07021 282 aaKnown RBP18.72■□□□□ 0.59
SMARCA2-211ENST00000417599 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
SMARCA2-211ENST00000417599 ZNF219Q9P2Y4 722 aaPredicted RBP18.5■□□□□ 0.55
SMARCA2-211ENST00000417599 CAPN15O75808 1086 aa18.45■□□□□ 0.54
SMARCA2-211ENST00000417599 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
SMARCA2-211ENST00000417599 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
SMARCA2-211ENST00000417599 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
SMARCA2-211ENST00000417599 POLA2Q14181 598 aa18.15■□□□□ 0.5
SMARCA2-211ENST00000417599 ABCB7O75027 752 aa18.07■□□□□ 0.48
SMARCA2-211ENST00000417599 DSG3P32926 999 aa18.03■□□□□ 0.48
SMARCA2-211ENST00000417599 FBLN2P98095 1184 aa18.02■□□□□ 0.48
SMARCA2-211ENST00000417599 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.48
SMARCA2-211ENST00000417599 FKBP8Q14318 412 aa17.94■□□□□ 0.46
SMARCA2-211ENST00000417599 MKRN4PQ13434 485 aaPredicted RBP17.87■□□□□ 0.45
SMARCA2-211ENST00000417599 SPDYE4A6NLX3 237 aa17.68■□□□□ 0.42
SMARCA2-211ENST00000417599 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
SMARCA2-211ENST00000417599 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
SMARCA2-211ENST00000417599 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
SMARCA2-211ENST00000417599 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
SMARCA2-211ENST00000417599 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
SMARCA2-211ENST00000417599 PROM2Q8N271 834 aa17.42■□□□□ 0.38
SMARCA2-211ENST00000417599 SSUH2Q9Y2M2 353 aa17.35■□□□□ 0.37
SMARCA2-211ENST00000417599 FBXO3Q9UK99 471 aa17.33■□□□□ 0.36
SMARCA2-211ENST00000417599 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
SMARCA2-211ENST00000417599 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMARCA2-211ENST00000417599 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
SMARCA2-211ENST00000417599 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
SMARCA2-211ENST00000417599 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
SMARCA2-211ENST00000417599 VASPP50552 380 aaPredicted RBP17.01■□□□□ 0.31
SMARCA2-211ENST00000417599 SPDYE1Q8NFV5 336 aaPredicted RBP16.91■□□□□ 0.3
SMARCA2-211ENST00000417599 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
SMARCA2-211ENST00000417599 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
SMARCA2-211ENST00000417599 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
SMARCA2-211ENST00000417599 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
SMARCA2-211ENST00000417599 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
SMARCA2-211ENST00000417599 IFNLR1Q8IU57 520 aaPredicted RBP16.74■□□□□ 0.27
SMARCA2-211ENST00000417599 MIER1Q8N108 512 aa16.73■□□□□ 0.27
SMARCA2-211ENST00000417599 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
SMARCA2-211ENST00000417599 PITPNM1O00562 1244 aa16.68■□□□□ 0.26
SMARCA2-211ENST00000417599 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
SMARCA2-211ENST00000417599 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
SMARCA2-211ENST00000417599 ZBTB47Q9UFB7 747 aaPredicted RBP16.66■□□□□ 0.26
SMARCA2-211ENST00000417599 SPOCK2Q92563 424 aa16.57■□□□□ 0.24
SMARCA2-211ENST00000417599 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
SMARCA2-211ENST00000417599 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
SMARCA2-211ENST00000417599 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMARCA2-211ENST00000417599 MNX1P50219 401 aaPredicted RBP16.32■□□□□ 0.2
SMARCA2-211ENST00000417599 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMARCA2-211ENST00000417599 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
SMARCA2-211ENST00000417599 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
SMARCA2-211ENST00000417599 PKD2Q13563 968 aa16.27■□□□□ 0.2
SMARCA2-211ENST00000417599 CIZ1Q9ULV3 898 aaPredicted RBP16.25■□□□□ 0.19
SMARCA2-211ENST00000417599 NUBP1P53384 320 aa16.24■□□□□ 0.19
SMARCA2-211ENST00000417599 GSE1Q14687 1217 aa16.23■□□□□ 0.19
SMARCA2-211ENST00000417599 FAM212AQ96EL1 285 aa16.22■□□□□ 0.19
SMARCA2-211ENST00000417599 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
SMARCA2-211ENST00000417599 FARP1Q9Y4F1 1045 aaPredicted RBP16.21■□□□□ 0.19
SMARCA2-211ENST00000417599 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
SMARCA2-211ENST00000417599 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
SMARCA2-211ENST00000417599 DCAF8Q5TAQ9 597 aa16.14■□□□□ 0.17
SMARCA2-211ENST00000417599 RASEFQ8IZ41 740 aa16.11■□□□□ 0.17
SMARCA2-211ENST00000417599 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms