RNA–Protein interactions for RNA: ENST00000399411.2

CCNB2P1-201, Transcript of cyclin B2 pseudogene 1, humanhuman

BASIC

Gene CCNB2P1, Length 1,150 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB2P1-201ENST00000399411 AEBP2Q6ZN18 517 aaPredicted RBP32.72■■■□□ 2.83
CCNB2P1-201ENST00000399411 CHIC1Q5VXU3 224 aa31.01■■■□□ 2.55
CCNB2P1-201ENST00000399411 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
CCNB2P1-201ENST00000399411 PHF23Q9BUL5 403 aaPredicted RBP27.64■■■□□ 2.02
CCNB2P1-201ENST00000399411 FOXD1Q16676 465 aa26.11■■□□□ 1.77
CCNB2P1-201ENST00000399411 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
CCNB2P1-201ENST00000399411 MSH5O43196 834 aa24.64■■□□□ 1.54
CCNB2P1-201ENST00000399411 PIAS4Q8N2W9 510 aaPredicted RBP24.41■■□□□ 1.5
CCNB2P1-201ENST00000399411 POTEDQ86YR6 584 aa24.22■■□□□ 1.47
CCNB2P1-201ENST00000399411 PPP6R1Q9UPN7 881 aa24.22■■□□□ 1.47
CCNB2P1-201ENST00000399411 ADRA2BP18089 450 aa24.16■■□□□ 1.46
CCNB2P1-201ENST00000399411 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
CCNB2P1-201ENST00000399411 DMRT2Q9Y5R5 561 aa22.22■■□□□ 1.15
CCNB2P1-201ENST00000399411 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
CCNB2P1-201ENST00000399411 PPP4R3CPQ6ZMV5 832 aa21.63■■□□□ 1.05
CCNB2P1-201ENST00000399411 HOXD11P31277 338 aaPredicted RBP21.34■■□□□ 1.01
CCNB2P1-201ENST00000399411 DCAF8L1A6NGE4 600 aa21.33■■□□□ 1.01
CCNB2P1-201ENST00000399411 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
CCNB2P1-201ENST00000399411 CACNB1Q02641 598 aaPredicted RBP21.2■□□□□ 0.98
CCNB2P1-201ENST00000399411 RNF216Q9NWF9 866 aaPredicted RBP21.16■□□□□ 0.98
CCNB2P1-201ENST00000399411 RNF39Q9H2S5 420 aa20.93■□□□□ 0.94
CCNB2P1-201ENST00000399411 NCBP3Q53F19 620 aaKnown RBP20.86■□□□□ 0.93
CCNB2P1-201ENST00000399411 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
CCNB2P1-201ENST00000399411 C1QBPQ07021 282 aaKnown RBP20.69■□□□□ 0.9
CCNB2P1-201ENST00000399411 NPM3O75607 178 aaKnown RBP20.42■□□□□ 0.86
CCNB2P1-201ENST00000399411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.85
CCNB2P1-201ENST00000399411 KCNA4P22459 653 aa19.84■□□□□ 0.77
CCNB2P1-201ENST00000399411 U3KPZ7 1027 aaPredicted RBP19.84■□□□□ 0.77
CCNB2P1-201ENST00000399411 CAPN15O75808 1086 aa19.64■□□□□ 0.73
CCNB2P1-201ENST00000399411 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
CCNB2P1-201ENST00000399411 DSG3P32926 999 aa19.52■□□□□ 0.72
CCNB2P1-201ENST00000399411 SLC4A2P04920 1241 aa19.51■□□□□ 0.71
CCNB2P1-201ENST00000399411 APLP2Q06481 763 aa19.49■□□□□ 0.71
CCNB2P1-201ENST00000399411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
CCNB2P1-201ENST00000399411 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
CCNB2P1-201ENST00000399411 ZNF219Q9P2Y4 722 aaPredicted RBP19.31■□□□□ 0.68
CCNB2P1-201ENST00000399411 TRHP20396 242 aaPredicted RBP19.26■□□□□ 0.67
CCNB2P1-201ENST00000399411 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
CCNB2P1-201ENST00000399411 ABCB7O75027 752 aa19.11■□□□□ 0.65
CCNB2P1-201ENST00000399411 POTEHQ6S545 545 aa18.98■□□□□ 0.63
CCNB2P1-201ENST00000399411 MYCNP04198 464 aaPredicted RBP18.97■□□□□ 0.63
CCNB2P1-201ENST00000399411 RBM42Q9BTD8 480 aaKnown RBP18.77■□□□□ 0.6
CCNB2P1-201ENST00000399411 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
CCNB2P1-201ENST00000399411 POLA2Q14181 598 aa18.7■□□□□ 0.58
CCNB2P1-201ENST00000399411 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
CCNB2P1-201ENST00000399411 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
CCNB2P1-201ENST00000399411 ATF5Q9Y2D1 282 aaPredicted RBP18.4■□□□□ 0.54
CCNB2P1-201ENST00000399411 CHRDL2Q6WN34 429 aa18.33■□□□□ 0.52
CCNB2P1-201ENST00000399411 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
CCNB2P1-201ENST00000399411 ZBTB22O15209 634 aa18.19■□□□□ 0.5
CCNB2P1-201ENST00000399411 ATXN8OSP0DMR3 200 aa18.16■□□□□ 0.5
CCNB2P1-201ENST00000399411 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
CCNB2P1-201ENST00000399411 REM2Q8IYK8 340 aaPredicted RBP18.02■□□□□ 0.48
CCNB2P1-201ENST00000399411 FBLN2P98095 1184 aa17.89■□□□□ 0.45
CCNB2P1-201ENST00000399411 PIP4P2Q8N4L2 257 aa17.82■□□□□ 0.44
CCNB2P1-201ENST00000399411 PITPNM1O00562 1244 aa17.81■□□□□ 0.44
CCNB2P1-201ENST00000399411 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
CCNB2P1-201ENST00000399411 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
CCNB2P1-201ENST00000399411 SPDYE2Q495Y8 402 aa17.8■□□□□ 0.44
CCNB2P1-201ENST00000399411 SP7Q8TDD2 431 aaPredicted RBP17.73■□□□□ 0.43
CCNB2P1-201ENST00000399411 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCNB2P1-201ENST00000399411 HAX1O00165 279 aa17.59■□□□□ 0.41
CCNB2P1-201ENST00000399411 MKRN4PQ13434 485 aaPredicted RBP17.57■□□□□ 0.4
CCNB2P1-201ENST00000399411 SPDYE1Q8NFV5 336 aaPredicted RBP17.54■□□□□ 0.4
CCNB2P1-201ENST00000399411 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
CCNB2P1-201ENST00000399411 SSUH2Q9Y2M2 353 aa17.49■□□□□ 0.39
CCNB2P1-201ENST00000399411 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
CCNB2P1-201ENST00000399411 PRKAR2AP13861 404 aaKnown RBP17.38■□□□□ 0.37
CCNB2P1-201ENST00000399411 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCNB2P1-201ENST00000399411 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
CCNB2P1-201ENST00000399411 EVX2Q03828 476 aa17.22■□□□□ 0.35
CCNB2P1-201ENST00000399411 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
CCNB2P1-201ENST00000399411 C19orf67A6NJJ6 358 aa17.15■□□□□ 0.34
CCNB2P1-201ENST00000399411 CHADLQ6NUI6 762 aa17.08■□□□□ 0.32
CCNB2P1-201ENST00000399411 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
CCNB2P1-201ENST00000399411 GABBR2O75899 941 aa16.93■□□□□ 0.3
CCNB2P1-201ENST00000399411 FARP1Q9Y4F1 1045 aaPredicted RBP16.88■□□□□ 0.29
CCNB2P1-201ENST00000399411 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
CCNB2P1-201ENST00000399411 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
CCNB2P1-201ENST00000399411 CLCN6P51797 869 aa16.78■□□□□ 0.28
CCNB2P1-201ENST00000399411 SPDYE4A6NLX3 237 aa16.74■□□□□ 0.27
CCNB2P1-201ENST00000399411 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
CCNB2P1-201ENST00000399411 LHX8Q68G74 356 aa16.62■□□□□ 0.25
CCNB2P1-201ENST00000399411 ZNF579Q8NAF0 562 aaKnown RBP16.57■□□□□ 0.24
CCNB2P1-201ENST00000399411 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
CCNB2P1-201ENST00000399411 DCBLD2Q96PD2 775 aa16.51■□□□□ 0.23
CCNB2P1-201ENST00000399411 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
CCNB2P1-201ENST00000399411 POTEIP0CG38 1075 aa16.49■□□□□ 0.23
CCNB2P1-201ENST00000399411 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCNB2P1-201ENST00000399411 MNX1P50219 401 aaPredicted RBP16.32■□□□□ 0.2
CCNB2P1-201ENST00000399411 GALR2O43603 387 aaPredicted RBP16.31■□□□□ 0.2
CCNB2P1-201ENST00000399411 PROM2Q8N271 834 aa16.28■□□□□ 0.2
CCNB2P1-201ENST00000399411 PHF12Q96QT6 1004 aa16.25■□□□□ 0.19
CCNB2P1-201ENST00000399411 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
CCNB2P1-201ENST00000399411 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
CCNB2P1-201ENST00000399411 MS4A3Q96HJ5 214 aa16.04■□□□□ 0.16
CCNB2P1-201ENST00000399411 ASTLQ6HA08 431 aaPredicted RBP16.02■□□□□ 0.16
CCNB2P1-201ENST00000399411 MIER1Q8N108 512 aa16.02■□□□□ 0.16
CCNB2P1-201ENST00000399411 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
CCNB2P1-201ENST00000399411 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms