Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 MIR3180-5-201ENST00000583743 153 ntBASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC024243.1-201ENST00000609234 778 ntBASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB11FIP1Q6WKZ4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 IER3-202ENST00000376377 1350 ntBASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB11FIP1Q6WKZ4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 SPDYE15P-201ENST00000424157 909 ntBASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB11FIP1Q6WKZ4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 LINC01311-201ENST00000565162 1445 ntBASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC005332.1-201ENST00000577698 1310 ntBASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB11FIP1Q6WKZ4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB11FIP1Q6WKZ4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB11FIP1Q6WKZ4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB11FIP1Q6WKZ4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB11FIP1Q6WKZ4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms