Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PPP4R4Q6NUP7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PPP4R4Q6NUP7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 HLA-G-202ENST00000376815 851 ntBASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 HLA-G-203ENST00000376818 1127 ntBASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 UNC93B4-201ENST00000505679 747 ntBASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 TMEM191A-211ENST00000637163 1067 ntBASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.99■□□□□ 0.47
PPP4R4Q6NUP7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 KRT17P3-201ENST00000420566 1262 ntBASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 AC005829.2-201ENST00000571422 1056 ntBASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PPP4R4Q6NUP7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.97■□□□□ 0.47
PPP4R4Q6NUP7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms