Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 UBE2SP1-201ENST00000450587 669 ntBASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 AC098590.1-201ENST00000468126 897 ntBASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF1Q5TC12 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF1Q5TC12 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms