Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 PKD1P6-201ENST00000343738 4769 ntBASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 AC132008.2-207ENST00000454517 770 ntBASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO4Q2I0M5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 KRT18P23-201ENST00000435622 1283 ntBASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 IGHV3-22-201ENST00000520721 359 ntBASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 AL157384.1-201ENST00000445995 2473 ntBASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RSPO4Q2I0M5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 AC034105.1-201ENST00000563488 319 ntBASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 AC011840.4-201ENST00000578471 627 ntBASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 AL596442.2-201ENST00000610240 980 ntBASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RSPO4Q2I0M5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 AC211486.1-202ENST00000416371 468 ntBASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 AC211476.1-201ENST00000503899 468 ntBASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.15■□□□□ 0.5
RSPO4Q2I0M5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms