Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.39■□□□□ 0.69
SCAPQ12770 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SCAPQ12770 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.39■□□□□ 0.69
SCAPQ12770 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCAPQ12770 AC004408.2-201ENST00000623613 2777 ntBASIC19.39■□□□□ 0.69
SCAPQ12770 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCAPQ12770 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SCAPQ12770 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.39■□□□□ 0.69
SCAPQ12770 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SCAPQ12770 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCAPQ12770 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SCAPQ12770 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SCAPQ12770 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAPQ12770 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAPQ12770 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAPQ12770 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCAPQ12770 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SCAPQ12770 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.38■□□□□ 0.69
SCAPQ12770 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAPQ12770 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCAPQ12770 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAPQ12770 TPM4P1-201ENST00000436100 807 ntBASIC19.38■□□□□ 0.69
SCAPQ12770 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAPQ12770 AC104076.2-201ENST00000448912 469 ntBASIC19.38■□□□□ 0.69
SCAPQ12770 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.38■□□□□ 0.69
SCAPQ12770 KRT18P41-201ENST00000518924 1277 ntBASIC19.38■□□□□ 0.69
SCAPQ12770 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.38■□□□□ 0.69
SCAPQ12770 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAPQ12770 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SCAPQ12770 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.38■□□□□ 0.69
SCAPQ12770 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAPQ12770 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAPQ12770 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
SCAPQ12770 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SCAPQ12770 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAPQ12770 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAPQ12770 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.37■□□□□ 0.69
SCAPQ12770 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.37■□□□□ 0.69
SCAPQ12770 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.37■□□□□ 0.69
SCAPQ12770 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.37■□□□□ 0.69
SCAPQ12770 AC073508.3-201ENST00000619697 1419 ntBASIC19.37■□□□□ 0.69
SCAPQ12770 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 KRT18P22-201ENST00000402024 1347 ntBASIC19.37■□□□□ 0.69
SCAPQ12770 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.37■□□□□ 0.69
SCAPQ12770 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SCAPQ12770 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.37■□□□□ 0.69
SCAPQ12770 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.37■□□□□ 0.69
SCAPQ12770 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SCAPQ12770 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.37■□□□□ 0.69
SCAPQ12770 CR769767.2-201ENST00000622735 460 ntBASIC19.37■□□□□ 0.69
SCAPQ12770 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCAPQ12770 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SCAPQ12770 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.37■□□□□ 0.69
SCAPQ12770 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.37■□□□□ 0.69
SCAPQ12770 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCAPQ12770 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 KRT8P45-201ENST00000414328 1447 ntBASIC19.36■□□□□ 0.69
SCAPQ12770 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SCAPQ12770 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.36■□□□□ 0.69
SCAPQ12770 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAPQ12770 HMGA1P5-201ENST00000412453 271 ntBASIC19.36■□□□□ 0.69
SCAPQ12770 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.36■□□□□ 0.69
SCAPQ12770 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.36■□□□□ 0.69
SCAPQ12770 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.36■□□□□ 0.69
SCAPQ12770 ECEL1P2-202ENST00000465689 757 ntBASIC19.36■□□□□ 0.69
SCAPQ12770 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.36■□□□□ 0.69
SCAPQ12770 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.36■□□□□ 0.69
SCAPQ12770 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.36■□□□□ 0.69
SCAPQ12770 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCAPQ12770 AC036111.1-201ENST00000533973 1582 ntBASIC19.36■□□□□ 0.69
SCAPQ12770 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SCAPQ12770 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.35■□□□□ 0.69
SCAPQ12770 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.35■□□□□ 0.69
SCAPQ12770 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCAPQ12770 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCAPQ12770 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms