Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.29■□□□□ 0.04
SPCS3P61009 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SPCS3P61009 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SPCS3P61009 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.29■□□□□ 0.04
SPCS3P61009 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.29■□□□□ 0.04
SPCS3P61009 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SPCS3P61009 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPCS3P61009 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SPCS3P61009 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.29■□□□□ 0.04
SPCS3P61009 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
SPCS3P61009 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.29■□□□□ 0.04
SPCS3P61009 AL121829.2-201ENST00000620908 328 ntBASIC15.29■□□□□ 0.04
SPCS3P61009 HLA-B-256ENST00000639848 1089 ntBASIC15.29■□□□□ 0.04
SPCS3P61009 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SPCS3P61009 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.29■□□□□ 0.04
SPCS3P61009 AL354751.1-201ENST00000412768 1863 ntBASIC15.29■□□□□ 0.04
SPCS3P61009 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
SPCS3P61009 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPCS3P61009 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SPCS3P61009 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.28■□□□□ 0.04
SPCS3P61009 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SPCS3P61009 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SPCS3P61009 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 TSPY21P-201ENST00000433481 731 ntBASIC15.28■□□□□ 0.04
SPCS3P61009 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.28■□□□□ 0.04
SPCS3P61009 AL121832.2-201ENST00000610979 668 ntBASIC15.28■□□□□ 0.04
SPCS3P61009 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.28■□□□□ 0.04
SPCS3P61009 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SPCS3P61009 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SPCS3P61009 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPCS3P61009 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SPCS3P61009 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SPCS3P61009 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SPCS3P61009 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.27■□□□□ 0.04
SPCS3P61009 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.27■□□□□ 0.04
SPCS3P61009 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
SPCS3P61009 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.27■□□□□ 0.04
SPCS3P61009 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.27■□□□□ 0.04
SPCS3P61009 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SPCS3P61009 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SPCS3P61009 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPCS3P61009 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.27■□□□□ 0.04
SPCS3P61009 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SPCS3P61009 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.27■□□□□ 0.04
SPCS3P61009 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms