Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH12P55289 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CDH12P55289 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH12P55289 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CDH12P55289 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH12P55289 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDH12P55289 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CDH12P55289 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 KRT17P3-201ENST00000420566 1262 ntBASIC17.52■□□□□ 0.4
CDH12P55289 AC026366.1-201ENST00000488803 879 ntBASIC17.52■□□□□ 0.4
CDH12P55289 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH12P55289 MTDHP1-201ENST00000605323 784 ntBASIC17.52■□□□□ 0.4
CDH12P55289 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH12P55289 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH12P55289 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH12P55289 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH12P55289 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH12P55289 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH12P55289 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CDH12P55289 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH12P55289 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.52■□□□□ 0.39
CDH12P55289 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.52■□□□□ 0.39
CDH12P55289 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH12P55289 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH12P55289 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CDH12P55289 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH12P55289 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH12P55289 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH12P55289 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH12P55289 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH12P55289 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH12P55289 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH12P55289 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH12P55289 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH12P55289 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH12P55289 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 AC233263.1-201ENST00000578059 224 ntBASIC17.51■□□□□ 0.39
CDH12P55289 AC069544.1-201ENST00000609399 999 ntBASIC17.51■□□□□ 0.39
CDH12P55289 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH12P55289 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH12P55289 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH12P55289 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH12P55289 NOC2LP2-201ENST00000407594 1944 ntBASIC17.51■□□□□ 0.39
CDH12P55289 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDH12P55289 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CDH12P55289 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH12P55289 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH12P55289 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH12P55289 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 AC126763.1-201ENST00000552015 2118 ntBASIC17.5■□□□□ 0.39
CDH12P55289 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH12P55289 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms