Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
EPHA4P54764 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA4P54764 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA4P54764 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.09■□□□□ 0.49
EPHA4P54764 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA4P54764 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA4P54764 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.08■□□□□ 0.49
EPHA4P54764 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 HOXB1-202ENST00000577092 1414 ntBASIC18.08■□□□□ 0.49
EPHA4P54764 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA4P54764 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.08■□□□□ 0.49
EPHA4P54764 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA4P54764 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA4P54764 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
EPHA4P54764 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA4P54764 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.08■□□□□ 0.48
EPHA4P54764 HBZP1-201ENST00000354915 429 ntBASIC18.08■□□□□ 0.48
EPHA4P54764 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.08■□□□□ 0.48
EPHA4P54764 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA4P54764 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA4P54764 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
EPHA4P54764 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.08■□□□□ 0.48
EPHA4P54764 AL158211.5-201ENST00000623583 2518 ntBASIC18.08■□□□□ 0.48
EPHA4P54764 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA4P54764 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
EPHA4P54764 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.08■□□□□ 0.48
EPHA4P54764 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
EPHA4P54764 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA4P54764 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA4P54764 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA4P54764 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA4P54764 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA4P54764 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.07■□□□□ 0.48
EPHA4P54764 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA4P54764 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.07■□□□□ 0.48
EPHA4P54764 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.07■□□□□ 0.48
EPHA4P54764 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.07■□□□□ 0.48
EPHA4P54764 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.07■□□□□ 0.48
EPHA4P54764 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.07■□□□□ 0.48
EPHA4P54764 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
EPHA4P54764 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.07■□□□□ 0.48
EPHA4P54764 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
EPHA4P54764 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.07■□□□□ 0.48
EPHA4P54764 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.07■□□□□ 0.48
EPHA4P54764 PCDHAC2-203ENST00000615316 3011 ntBASIC18.07■□□□□ 0.48
EPHA4P54764 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
EPHA4P54764 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
EPHA4P54764 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA4P54764 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA4P54764 AC008556.1-201ENST00000610908 2040 ntBASIC18.06■□□□□ 0.48
EPHA4P54764 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA4P54764 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.06■□□□□ 0.48
EPHA4P54764 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA4P54764 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EPHA4P54764 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 MIR564-202ENST00000385049 94 ntBASIC18.06■□□□□ 0.48
EPHA4P54764 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.06■□□□□ 0.48
EPHA4P54764 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.06■□□□□ 0.48
EPHA4P54764 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
EPHA4P54764 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EPHA4P54764 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA4P54764 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA4P54764 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA4P54764 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHA4P54764 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHA4P54764 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
EPHA4P54764 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
EPHA4P54764 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.05■□□□□ 0.48
EPHA4P54764 KRT18P23-201ENST00000435622 1283 ntBASIC18.05■□□□□ 0.48
EPHA4P54764 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.05■□□□□ 0.48
EPHA4P54764 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHA4P54764 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHA4P54764 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms