Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDE1AP54750 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
PDE1AP54750 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE1AP54750 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDE1AP54750 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.96■■□□□ 1.27
PDE1AP54750 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE1AP54750 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PDE1AP54750 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE1AP54750 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDE1AP54750 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PDE1AP54750 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.96■■□□□ 1.27
PDE1AP54750 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE1AP54750 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
PDE1AP54750 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
PDE1AP54750 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PDE1AP54750 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
PDE1AP54750 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 MIR1238-201ENST00000408483 83 ntBASIC22.95■■□□□ 1.26
PDE1AP54750 AL596275.1-201ENST00000423464 877 ntBASIC22.95■■□□□ 1.26
PDE1AP54750 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.26
PDE1AP54750 AC093827.2-201ENST00000512654 315 ntBASIC22.95■■□□□ 1.26
PDE1AP54750 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.95■■□□□ 1.26
PDE1AP54750 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.95■■□□□ 1.26
PDE1AP54750 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE1AP54750 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
PDE1AP54750 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PDE1AP54750 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
PDE1AP54750 AC090164.3-201ENST00000610780 2143 ntBASIC22.94■■□□□ 1.26
PDE1AP54750 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.94■■□□□ 1.26
PDE1AP54750 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.94■■□□□ 1.26
PDE1AP54750 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.94■■□□□ 1.26
PDE1AP54750 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.94■■□□□ 1.26
PDE1AP54750 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDE1AP54750 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.93■■□□□ 1.26
PDE1AP54750 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDE1AP54750 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
PDE1AP54750 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.93■■□□□ 1.26
PDE1AP54750 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDE1AP54750 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.93■■□□□ 1.26
PDE1AP54750 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDE1AP54750 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PDE1AP54750 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PDE1AP54750 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDE1AP54750 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.92■■□□□ 1.26
PDE1AP54750 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.92■■□□□ 1.26
PDE1AP54750 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.92■■□□□ 1.26
PDE1AP54750 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.92■■□□□ 1.26
PDE1AP54750 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.92■■□□□ 1.26
PDE1AP54750 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
PDE1AP54750 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.92■■□□□ 1.26
PDE1AP54750 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.92■■□□□ 1.26
PDE1AP54750 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
PDE1AP54750 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
PDE1AP54750 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDE1AP54750 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDE1AP54750 KRT8P9-201ENST00000558927 1449 ntBASIC22.91■■□□□ 1.26
PDE1AP54750 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDE1AP54750 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDE1AP54750 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDE1AP54750 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDE1AP54750 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.91■■□□□ 1.26
PDE1AP54750 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
PDE1AP54750 SLC25A1P2-201ENST00000430693 912 ntBASIC22.91■■□□□ 1.26
PDE1AP54750 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.91■■□□□ 1.26
PDE1AP54750 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDE1AP54750 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDE1AP54750 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms