Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
GPC3P51654 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.74■□□□□ 0.91
GPC3P51654 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.74■□□□□ 0.91
GPC3P51654 MIR3180-5-201ENST00000583743 153 ntBASIC20.74■□□□□ 0.91
GPC3P51654 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.74■□□□□ 0.91
GPC3P51654 AC091076.1-201ENST00000610741 619 ntBASIC20.74■□□□□ 0.91
GPC3P51654 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
GPC3P51654 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.74■□□□□ 0.91
GPC3P51654 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
GPC3P51654 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.73■□□□□ 0.91
GPC3P51654 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.73■□□□□ 0.91
GPC3P51654 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GPC3P51654 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.73■□□□□ 0.91
GPC3P51654 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 FAM86EP-206ENST00000510506 987 ntBASIC20.73■□□□□ 0.91
GPC3P51654 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
GPC3P51654 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.73■□□□□ 0.91
GPC3P51654 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
GPC3P51654 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.73■□□□□ 0.91
GPC3P51654 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.73■□□□□ 0.91
GPC3P51654 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC3P51654 FEM1AP3-201ENST00000403722 1741 ntBASIC20.73■□□□□ 0.91
GPC3P51654 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
GPC3P51654 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.72■□□□□ 0.91
GPC3P51654 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GPC3P51654 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
GPC3P51654 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC3P51654 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC3P51654 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.72■□□□□ 0.91
GPC3P51654 IRX1P1-201ENST00000438849 1838 ntBASIC20.72■□□□□ 0.91
GPC3P51654 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC3P51654 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
GPC3P51654 SPDYE15P-201ENST00000424157 909 ntBASIC20.72■□□□□ 0.91
GPC3P51654 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC3P51654 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.72■□□□□ 0.91
GPC3P51654 AC112907.2-201ENST00000448639 330 ntBASIC20.72■□□□□ 0.91
GPC3P51654 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.72■□□□□ 0.91
GPC3P51654 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.72■□□□□ 0.91
GPC3P51654 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.72■□□□□ 0.91
GPC3P51654 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.72■□□□□ 0.91
GPC3P51654 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.72■□□□□ 0.91
GPC3P51654 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC3P51654 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC3P51654 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.72■□□□□ 0.91
GPC3P51654 AC018445.3-201ENST00000624177 1945 ntBASIC20.72■□□□□ 0.91
GPC3P51654 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
GPC3P51654 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC3P51654 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC3P51654 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC3P51654 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
GPC3P51654 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC3P51654 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC3P51654 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.71■□□□□ 0.91
GPC3P51654 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
GPC3P51654 HYMAI.1-201ENST00000620949 238 ntBASIC20.71■□□□□ 0.91
GPC3P51654 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.71■□□□□ 0.91
GPC3P51654 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC3P51654 AL512353.2-201ENST00000448759 1962 ntBASIC20.7■□□□□ 0.9
GPC3P51654 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.7■□□□□ 0.9
GPC3P51654 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.7■□□□□ 0.9
GPC3P51654 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.7■□□□□ 0.9
GPC3P51654 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.7■□□□□ 0.9
GPC3P51654 AC083849.1-201ENST00000615227 514 ntBASIC20.7■□□□□ 0.9
GPC3P51654 AP000550.4-202ENST00000639755 178 ntBASIC20.7■□□□□ 0.9
GPC3P51654 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GPC3P51654 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms