Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 MESTP1-201ENST00000404287 994 ntBASIC20.29■□□□□ 0.84
PDE6CP51160 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE6CP51160 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE6CP51160 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE6CP51160 AC005363.2-201ENST00000618631 242 ntBASIC20.29■□□□□ 0.84
PDE6CP51160 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDE6CP51160 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 RCC2P6-201ENST00000526625 1557 ntBASIC20.29■□□□□ 0.84
PDE6CP51160 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE6CP51160 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PDE6CP51160 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
PDE6CP51160 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.28■□□□□ 0.84
PDE6CP51160 AL138781.2-201ENST00000617896 1843 ntBASIC20.28■□□□□ 0.84
PDE6CP51160 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PDE6CP51160 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
PDE6CP51160 AC004951.3-201ENST00000418645 1148 ntBASIC20.28■□□□□ 0.84
PDE6CP51160 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDE6CP51160 PRSS44-201ENST00000515154 1146 ntBASIC20.28■□□□□ 0.84
PDE6CP51160 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.28■□□□□ 0.84
PDE6CP51160 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PDE6CP51160 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.28■□□□□ 0.84
PDE6CP51160 AC083906.6-201ENST00000641366 219 ntBASIC20.28■□□□□ 0.84
PDE6CP51160 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 AC093525.10-201ENST00000625130 1569 ntBASIC20.28■□□□□ 0.84
PDE6CP51160 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PDE6CP51160 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE6CP51160 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6CP51160 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE6CP51160 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDE6CP51160 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE6CP51160 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDE6CP51160 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE6CP51160 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PDE6CP51160 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.27■□□□□ 0.84
PDE6CP51160 AL390955.1-201ENST00000428694 934 ntBASIC20.27■□□□□ 0.84
PDE6CP51160 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.27■□□□□ 0.84
PDE6CP51160 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE6CP51160 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE6CP51160 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PDE6CP51160 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PDE6CP51160 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6CP51160 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6CP51160 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6CP51160 AC026471.1-201ENST00000564629 3026 ntBASIC20.27■□□□□ 0.83
PDE6CP51160 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PDE6CP51160 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PDE6CP51160 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PDE6CP51160 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDE6CP51160 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE6CP51160 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE6CP51160 MIR1224-201ENST00000408193 85 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms