Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF144AP50876 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF144AP50876 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF144AP50876 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF144AP50876 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF144AP50876 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF144AP50876 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF144AP50876 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF144AP50876 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNF144AP50876 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF144AP50876 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF144AP50876 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF144AP50876 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF144AP50876 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF144AP50876 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF144AP50876 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.46■□□□□ 0.39
RNF144AP50876 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF144AP50876 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF144AP50876 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RNF144AP50876 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
RNF144AP50876 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNF144AP50876 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF144AP50876 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.38
RNF144AP50876 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.46■□□□□ 0.38
RNF144AP50876 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.46■□□□□ 0.38
RNF144AP50876 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF144AP50876 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RNF144AP50876 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
RNF144AP50876 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF144AP50876 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF144AP50876 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 FAM207BP-201ENST00000447172 505 ntBASIC17.45■□□□□ 0.38
RNF144AP50876 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF144AP50876 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF144AP50876 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.45■□□□□ 0.38
RNF144AP50876 AC233702.5-201ENST00000584107 538 ntBASIC17.45■□□□□ 0.38
RNF144AP50876 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF144AP50876 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
RNF144AP50876 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RNF144AP50876 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF144AP50876 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF144AP50876 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF144AP50876 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF144AP50876 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF144AP50876 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF144AP50876 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF144AP50876 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF144AP50876 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF144AP50876 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF144AP50876 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RNF144AP50876 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 SNORA78-201ENST00000459373 127 ntBASIC17.44■□□□□ 0.38
RNF144AP50876 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms