Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPT1AP50416 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPT1AP50416 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPT1AP50416 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.81■□□□□ 0.92
CPT1AP50416 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPT1AP50416 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.81■□□□□ 0.92
CPT1AP50416 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.81■□□□□ 0.92
CPT1AP50416 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.81■□□□□ 0.92
CPT1AP50416 IRX1P1-201ENST00000438849 1838 ntBASIC20.81■□□□□ 0.92
CPT1AP50416 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.8■□□□□ 0.92
CPT1AP50416 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CPT1AP50416 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CPT1AP50416 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.8■□□□□ 0.92
CPT1AP50416 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.8■□□□□ 0.92
CPT1AP50416 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CPT1AP50416 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.8■□□□□ 0.92
CPT1AP50416 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 FDX1P1-201ENST00000449115 551 ntBASIC20.8■□□□□ 0.92
CPT1AP50416 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.8■□□□□ 0.92
CPT1AP50416 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CPT1AP50416 AC006333.2-201ENST00000607957 2099 ntBASIC20.8■□□□□ 0.92
CPT1AP50416 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.8■□□□□ 0.92
CPT1AP50416 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CPT1AP50416 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPT1AP50416 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.8■□□□□ 0.92
CPT1AP50416 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.79■□□□□ 0.92
CPT1AP50416 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 AC091304.2-201ENST00000564639 760 ntBASIC20.79■□□□□ 0.92
CPT1AP50416 LINC01711-201ENST00000598340 967 ntBASIC20.79■□□□□ 0.92
CPT1AP50416 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.79■□□□□ 0.92
CPT1AP50416 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.79■□□□□ 0.92
CPT1AP50416 AL390719.2-201ENST00000606993 987 ntBASIC20.79■□□□□ 0.92
CPT1AP50416 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CPT1AP50416 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPT1AP50416 KRT8P10-201ENST00000450021 1447 ntBASIC20.78■□□□□ 0.92
CPT1AP50416 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CPT1AP50416 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 FP475955.4-201ENST00000623131 1990 ntBASIC20.78■□□□□ 0.92
CPT1AP50416 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
CPT1AP50416 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.78■□□□□ 0.92
CPT1AP50416 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.78■□□□□ 0.92
CPT1AP50416 IGHV3-41-201ENST00000613121 348 ntBASIC20.78■□□□□ 0.92
CPT1AP50416 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.78■□□□□ 0.92
CPT1AP50416 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.78■□□□□ 0.92
CPT1AP50416 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPT1AP50416 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPT1AP50416 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.77■□□□□ 0.92
CPT1AP50416 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPT1AP50416 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPT1AP50416 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPT1AP50416 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPT1AP50416 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPT1AP50416 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.77■□□□□ 0.92
CPT1AP50416 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPT1AP50416 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.77■□□□□ 0.92
CPT1AP50416 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPT1AP50416 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.77■□□□□ 0.92
CPT1AP50416 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms