Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 KRT8P8-201ENST00000434750 1448 ntBASIC16.18■□□□□ 0.18
CBX5P45973 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX5P45973 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.18■□□□□ 0.18
CBX5P45973 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX5P45973 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CBX5P45973 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CBX5P45973 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CBX5P45973 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 GPX1P1-201ENST00000388829 606 ntBASIC16.17■□□□□ 0.18
CBX5P45973 LSM12P1-201ENST00000411836 588 ntBASIC16.17■□□□□ 0.18
CBX5P45973 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX5P45973 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.17■□□□□ 0.18
CBX5P45973 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX5P45973 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX5P45973 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 KRT17P1-201ENST00000399211 1546 ntBASIC16.17■□□□□ 0.18
CBX5P45973 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CBX5P45973 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX5P45973 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX5P45973 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX5P45973 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CBX5P45973 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX5P45973 ANO7L1-203ENST00000602586 1720 ntBASIC16.16■□□□□ 0.18
CBX5P45973 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CBX5P45973 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CBX5P45973 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.16■□□□□ 0.18
CBX5P45973 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.16■□□□□ 0.18
CBX5P45973 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.16■□□□□ 0.18
CBX5P45973 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.16■□□□□ 0.18
CBX5P45973 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CBX5P45973 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CBX5P45973 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.16■□□□□ 0.18
CBX5P45973 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX5P45973 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX5P45973 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CBX5P45973 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX5P45973 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX5P45973 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CBX5P45973 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.15■□□□□ 0.18
CBX5P45973 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CBX5P45973 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CBX5P45973 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.15■□□□□ 0.18
CBX5P45973 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CBX5P45973 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.15■□□□□ 0.18
CBX5P45973 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX5P45973 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms