Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCLP35914 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLP35914 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLP35914 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLP35914 MIR564-202ENST00000385049 94 ntBASIC18.69■□□□□ 0.58
HMGCLP35914 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLP35914 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HMGCLP35914 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGCLP35914 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLP35914 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLP35914 LINC01023-201ENST00000606054 436 ntBASIC18.69■□□□□ 0.58
HMGCLP35914 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLP35914 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLP35914 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLP35914 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLP35914 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLP35914 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLP35914 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLP35914 ANO7L1-203ENST00000602586 1720 ntBASIC18.69■□□□□ 0.58
HMGCLP35914 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCLP35914 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMGCLP35914 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCLP35914 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HMGCLP35914 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
HMGCLP35914 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGCLP35914 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HMGCLP35914 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGCLP35914 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
HMGCLP35914 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLP35914 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
HMGCLP35914 AC036111.1-201ENST00000533973 1582 ntBASIC18.68■□□□□ 0.58
HMGCLP35914 KRT8P45-201ENST00000414328 1447 ntBASIC18.67■□□□□ 0.58
HMGCLP35914 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLP35914 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLP35914 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMGCLP35914 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HMGCLP35914 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HMGCLP35914 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
HMGCLP35914 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLP35914 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HMGCLP35914 SLC25A3P1-201ENST00000443844 931 ntBASIC18.67■□□□□ 0.58
HMGCLP35914 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLP35914 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.67■□□□□ 0.58
HMGCLP35914 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLP35914 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLP35914 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
HMGCLP35914 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
HMGCLP35914 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCLP35914 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMGCLP35914 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCLP35914 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCLP35914 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGCLP35914 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGCLP35914 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCLP35914 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HMGCLP35914 AC034236.2-201ENST00000606662 1610 ntBASIC18.66■□□□□ 0.58
HMGCLP35914 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLP35914 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms