Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19■□□□□ 0.63
RPA3P35244 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 KRASP1-201ENST00000407852 552 ntBASIC19■□□□□ 0.63
RPA3P35244 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19■□□□□ 0.63
RPA3P35244 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19■□□□□ 0.63
RPA3P35244 C1QBPP2-201ENST00000528754 825 ntBASIC19■□□□□ 0.63
RPA3P35244 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19■□□□□ 0.63
RPA3P35244 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19■□□□□ 0.63
RPA3P35244 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RPA3P35244 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19■□□□□ 0.63
RPA3P35244 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPA3P35244 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RPA3P35244 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPA3P35244 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RPA3P35244 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RPA3P35244 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RPA3P35244 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
RPA3P35244 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RPA3P35244 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.99■□□□□ 0.63
RPA3P35244 NBPF21P-201ENST00000425093 1451 ntBASIC18.99■□□□□ 0.63
RPA3P35244 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.99■□□□□ 0.63
RPA3P35244 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.99■□□□□ 0.63
RPA3P35244 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.99■□□□□ 0.63
RPA3P35244 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.99■□□□□ 0.63
RPA3P35244 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RPA3P35244 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 AC073592.3-201ENST00000625118 1834 ntBASIC18.99■□□□□ 0.63
RPA3P35244 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.99■□□□□ 0.63
RPA3P35244 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RPA3P35244 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RPA3P35244 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RPA3P35244 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RPA3P35244 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPA3P35244 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RPA3P35244 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 YBX1P10-201ENST00000444752 975 ntBASIC18.98■□□□□ 0.63
RPA3P35244 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RPA3P35244 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.98■□□□□ 0.63
RPA3P35244 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.98■□□□□ 0.63
RPA3P35244 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.98■□□□□ 0.63
RPA3P35244 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.98■□□□□ 0.63
RPA3P35244 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.98■□□□□ 0.63
RPA3P35244 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.98■□□□□ 0.63
RPA3P35244 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPA3P35244 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.98■□□□□ 0.63
RPA3P35244 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
RPA3P35244 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms